Deinococcus geothermalis: Dgeo_0868
Help
Entry
Dgeo_0868 CDS
T00353
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dge
Deinococcus geothermalis
Pathway
dge03420
Nucleotide excision repair
dge03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dgeo_0868
03430 Mismatch repair
Dgeo_0868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dge03400
]
Dgeo_0868
Enzymes [BR:
dge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dgeo_0868
DNA repair and recombination proteins [BR:
dge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dgeo_0868
MMR (mismatch excision repair)
Other MMR factors
Dgeo_0868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Costars
Motif
Other DBs
NCBI-ProteinID:
ABF45170
UniProt:
Q1J014
LinkDB
All DBs
Position
927025..929250
Genome browser
AA seq
741 aa
AA seq
DB search
MPDLPASSLLAQLNPNQAQAANHYTGPALVIAGAGSGKTRTLVYRIAHLIGHYGVDPGEI
LAVTFTNKAAAEMRERARHLVEGADRLWMSTFHSAGVRILRAYGEHIGLKRGFVIYDDDD
QLDILKEIMGSIPGIGAETHPRVLRGILDRAKSNLLTPADLARHPEPFISGLPREVAAEA
YRRYEARKKGQNAIDFGDLITETVRLFQEVPAVLERVQDRARFIHVDEYQDTNKAQYELT
RLLASRDRNLLVVGDPDQSIYRFRGADIQNILDFQKDYLDAKVYMLEQNYRSSARVLTIA
NKLIENNAERLEKTLRPVKEDGHPVLFHRATDQRAEGDFVAEWLTRLHAEGMRFSDMAVL
YRTNAQSRVIEESLRRVQIPAKIVGGVGFYDRREIKDVLAYARLAINPDDDVALRRIIGR
PKRGIGDTALERLMEWARVNGTSILTACAHAQELNILERGAQKAVEFAGLMHAMSEAADN
DEPGPFLRYVIETSGYLDLLRQEGQEGQVRLENLEELVSAAEEWSRENEGTIGDFLDDAA
LLSSVDDMRTKQENKDVPEDAVTLMTLHNAKGLEFPVVFIVGTEEGLLPSKNALLEPGGI
EEERRLFYVGITRAMERLFLTAAQNRMQYGKTLATEDSRFLEEIKGGFDTVDAYGQVIDD
RPKSWKEYRPTESARPGAVKNTSPLTEGMAYRGGEKVRHPKFGEGQVLAVAGLGDRQEVT
VHFPSAGTKKLLVKFANLTRA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtgccggacctccccgcctcttctctgcttgcccagctcaaccccaaccaggcgcaggcc
gccaaccactacaccggccccgcgctggtgattgctggggcgggcagcggcaagacgcgc
acactggtctaccgcatcgcgcacctgatcgggcattacggcgtggaccctggcgagatt
ctggccgtgacctttaccaacaaggcagcggccgagatgcgcgagcgcgcccggcacctg
gttgagggcgcggaccggctgtggatgagcacctttcacagcgcgggtgtccgcattctg
cgggcttacggcgaacacattggtttgaaacgcggcttcgtgatctatgacgacgacgat
cagctggacatcctcaaggagatcatgggatctattcccggcattggcgcggagacccat
ccccgcgtcctgcgcggtatcctcgaccgcgccaagagcaacctgctgacgccagccgat
cttgcccgccaccccgaacccttcatcagcggcttgccgcgcgaggttgccgctgaggcg
taccgccgctacgaggcccgcaagaagggccagaacgcgattgatttcggtgacctgatt
acggaaactgtccggctctttcaggaagtgcccgctgtccttgagcgcgtccaggaccgt
gcccgttttatccacgtggacgagtatcaggatacgaacaaggcgcagtatgagctgacg
cgcttgctcgcaagtcgagatcgaaacctgcttgttgtgggtgaccccgatcagtcgatc
taccgctttcgtggtgccgacattcaaaatatcctcgacttccagaaagactatctcgac
gccaaggtctacatgctggaacagaattaccgctccagtgcgcgcgtccttaccattgcc
aacaaactgatcgagaacaacgccgagcgcctagaaaagacgctgcggccggtgaaggaa
gacgggcacccggtcctctttcaccgggcgaccgatcagcgggccgagggcgattttgtg
gcagagtggctgacgcgcctgcacgccgaggggatgaggttctcggacatggcggtgctg
taccgcaccaacgcccagtcccgcgtgatcgaggaatcgctgcgccgcgtacagattccc
gccaagatcgtggggggtgtgggcttctatgaccgccgcgagatcaaggacgtgctggcc
tatgcccgccttgccatcaatcctgacgacgacgtggcgctgcgccgtatcatcgggcgg
cccaagcgcggcattggagacaccgcgctcgaacggctgatggaatgggcgcgggtcaac
ggcacctccatcctgactgcctgcgcccatgctcaggaactcaacattctggagcggggt
gcacagaaggccgtggaatttgcgggcctcatgcacgcgatgagcgaggccgccgacaac
gacgaaccggggccgttcctgcgttacgtcattgagacgagcggttacctcgatctcctg
cgccaggaagggcaggagggccaggtgcggctggagaacctcgaagaactcgtcagcgcc
gccgaggaatggtcgcgcgagaacgagggcaccatcggggacttcctcgatgacgccgcg
ctgctctcgagcgtggacgacatgcgcacgaagcaggaaaacaaggacgtgccggaagac
gccgtcaccctgatgacgctgcacaacgccaagggcctggagttcccagtggtgtttatc
gtggggaccgaagagggcctgcttcccagcaagaatgccctgcttgagccgggcggcatt
gaggaggagcggcgcctcttctatgtgggcatcacgcgggcgatggagcgcctcttcctg
accgctgcgcaaaaccggatgcagtacggcaagaccctcgccaccgaggacagccgcttt
ctggaggaaatcaagggcggcttcgacacggtggatgcctacggtcaggtgattgatgac
cgcccgaagagttggaaggaataccgcccaaccgagtctgcgcgccccggtgcggttaag
aacaccagcccgctgacggaaggaatggcctaccgtggtggcgaaaaggtccggcacccc
aagttcggggaagggcaggtgctggccgtggcgggcctgggcgaccggcaggaggtgacg
gtgcatttcccgtcggcgggcacaaaaaagctgctggtgaagttcgccaatctgacgaga
gcttga
DBGET
integrated database retrieval system
