Deinococcus geothermalis: Dgeo_0899
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Entry
Dgeo_0899 CDS
T00353
Name
(GenBank) DNA mismatch repair protein, MutS family
KO
K07456
DNA mismatch repair protein MutS2
Organism
dge
Deinococcus geothermalis
Pathway
dge03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Dgeo_0899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dge03400
]
Dgeo_0899
DNA repair and recombination proteins [BR:
dge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Dgeo_0899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
CCDC47
HR1
Motif
Other DBs
NCBI-ProteinID:
ABF45201
UniProt:
Q1IZY3
LinkDB
All DBs
Position
958139..960508
Genome browser
AA seq
789 aa
AA seq
DB search
MHSAFPTGPKPHSARSVGGSVVILLPEMPFAPRALTALDFPRIRDALAERSATPLGVERA
RALLPSEDGDRIRRELDEVEDALFGVSLALGGIQDIRELYTRALEGRVLSGQELLTAAYS
LDGAMSVKRAINANSRGPLKEVALSLGDHSELVRRVLSALDRDGAVRDDASHKLRDLRRR
IEPLRSRIRERLAATLDRWADVLQEHIVTIRRDRYVLPVQASRVGQVQGIIVDASATGQT
YFVEPAAVTPLNNELTRLILDEEAEVRRILSELSGLFAADADVPMTLATVAELDLIAAKA
RLARDWRLNRPEPASDHTYDLREARHPLIEHPVPNDIELGQTKLLLITGPNMGGKTATLK
TLGLAVLMHQCGMYVAAARARLPVVRDVLVDIGDEQSIEASLSTFASHLKHLRFVLRHAG
PDTLVLIDELGSGTDPEEGAALAQALIETLLAQDARGIITSHLSPLKLFALETPGLKNAS
MSFDLATLSPTYHLQVGQPGRSYALAIARRMGLPPEVLDRAAQLLGPDAGLMERMLEGLE
RERAELATQLNTATTARREAEAELARARQERETLEQRRNEMLAEAAQKAESLYADAIERV
RTLRARAQEESARPRVMQELRELRTAAQKARPAPPPSREERGDPLRVGSQVDVPAYGATG
QVLEVRGDDLVVQLGVMKVGVKRRDVRVKPEPKVKAPRPSFAGTSPNTFQNELQLRGLGV
EEAVEELRHAIAEAHALKETPLRVVHGKGQGVLRRLLRDYLKTDKRVESFHDAEANQGGH
GVTIVNVKV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcactcggctttccccaccggccctaagccacacagcgcacgttcggtgggcgggtcc
gttgttatcctcctgcctgagatgccgtttgccccccgtgctctgaccgccctggacttc
ccccgcattcgtgacgccctggccgagcgcagcgccacgcccctgggggtggagcgggca
cgggcgctgctgccctccgaggacggggaccgcatccggcgggagctggacgaggtggaa
gacgcgcttttcggggtgagcctcgcgctgggcggcattcaggacattcgcgagctgtac
acccgggcgctggagggccgcgtgctctccggccaggaactgctgacagccgcctattcg
ctcgacggcgcgatgagcgtgaaacgggccatcaatgccaattcgcgcgggccgctgaag
gaggtggccctcagcctgggagatcacagcgagctggtgcgccgcgtgctcagcgcgctc
gaccgcgacggggccgtgcgcgacgacgccagccacaaactgcgcgacctgcgccgccgg
atcgagcctttgcgcagccgcattcgcgagcggctggccgctaccctcgaccgctgggca
gatgtgctgcaggaacacatcgtcacgatccggcgcgaccgctacgtgttgccggtgcag
gccagccgggtagggcaggtacagggcatcatcgtggacgcctcggctaccggacagacg
tactttgtcgaacccgccgccgtcaccccgctcaacaacgaactgacccggctcattctc
gacgaggaggccgaggtccggcgcatcctcagcgagctgtcgggcctgtttgccgccgat
gctgacgtgccgatgacgctcgccaccgtcgctgaactcgatctgatcgctgccaaggcc
cgcctggcccgcgactggcggctcaaccggcccgagccggcgagcgaccacacctacgac
ctgcgcgaggcccgccaccctttgatcgagcatccagtgcccaacgacatcgagctgggc
cagaccaagctgctgctgatcaccgggccgaatatgggcggcaagacggccaccctcaaa
actctcggcctcgctgtgctgatgcaccagtgcgggatgtatgtggctgcggcgcgtgcc
cggctgccggtggtccgcgacgtgctggtggacatcggagacgagcagagcatcgaggcg
agcctctcgactttcgcctcccacctcaagcacctgcgcttcgtgctgcgccatgccgga
cccgacaccctggtcctgatcgacgagctgggcagcggcactgaccccgaggagggggcc
gcgctcgcacaggcgctgatcgagacactgctggctcaggacgcgcgcggcatcatcacc
tcccacctctcgcccctgaaactcttcgccttggaaacgcccggcctgaaaaacgcgagc
atgagttttgaccttgcgaccctcagcccgacctatcatctgcaagtcggccagccgggc
cgctcctacgcgctggcgattgcgcgccggatgggcctgccgccggaggtgctggaccgt
gccgcgcagctcctcggccccgatgccggtctgatggaacggatgctcgagggcctggaa
cgcgaacgcgctgagctggcgacgcagctgaacaccgccaccaccgcccgccgtgaggcg
gaggccgaactcgcccgcgcccgtcaggaacgcgagacgctggagcagcggcgcaacgag
atgctggccgaggctgcgcagaaagccgagagcctgtatgccgatgccatcgagcgtgtg
cggacgctgcgtgcccgcgcgcaggaggagagcgcccgcccccgcgtgatgcaggaactg
cgcgagctgcgcaccgccgcccaaaaggcccgcccggccccgcccccttcgcgggaggaa
cgcggcgatcccctccgcgtggggagccaggtggacgtgcctgcttacggcgcgactggg
caggtgttggaggtgcgcggcgatgacctggtggttcagctcggcgtgatgaaggtgggc
gtgaaacggcgggacgtacgtgtcaaacctgaaccaaaggtcaaggcgccccgccccagc
tttgctggaaccagcccaaacactttccagaacgagttgcagctgcgtggtctgggggtc
gaggaggccgttgaggaactgcgccatgcgattgccgaggcgcacgcgctcaaggagacg
cccctacgggtggtccacggcaagggccagggcgtgctgcggcggctgctgcgcgactat
ctcaagaccgataagcgggtggagtctttccacgacgccgaggccaaccagggcgggcac
ggcgtaaccatcgtcaacgtgaaggtataa
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