Deinococcus geothermalis: Dgeo_1234
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Entry
Dgeo_1234 CDS
T00353
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
dge
Deinococcus geothermalis
Brite
KEGG Orthology (KO) [BR:
dge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dge03021
]
Dgeo_1234
03009 Ribosome biogenesis [BR:
dge03009
]
Dgeo_1234
Transcription machinery [BR:
dge03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Dgeo_1234
Ribosome biogenesis [BR:
dge03009
]
Prokaryotic type
rRNA transcription factors
Dgeo_1234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
S1
KH_1
MCM
Motif
Other DBs
NCBI-ProteinID:
ABF45530
UniProt:
Q1IZ04
LinkDB
All DBs
Position
1312999..1314186
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AA seq
395 aa
AA seq
DB search
MAQPEFNFADALREVAQARNINELQLIEAFEQSLAQAYSRNVEPDRRVEVHLDPVSGELE
VLIVREVVEKVEDENLQISLADALELDPGVEIGMEMEFPVDREKFSRIALQAAKQTLTQK
MRETERNVVYNEYKDREGQVLTAQVVRSDNKGNWFVELGAGEAILPPREQIPGEKLVPGN
RVKIYLKEVRKTPKGPTILASRADERLLEYLLRQEIPEVANGIVEIKAIAREAGQRSKVA
VYSHNPNVDPIGACIGHRGNRIQAVTGELGRERVDVILWDANARDFIRNALSPAKVGLIE
VRPDTREATVTVTPDQLSLAIGKGGQNVRLAAKLTGFKIDLRETAAIQDLDAAMQQALQE
EQGNTGPSSAAASAFDALFRDSKSVATASPDDEQE
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcccaacctgaatttaattttgcggacgcgttgcgtgaagtggcgcaggcccgcaac
atcaatgagctgcagctgatcgaggcgttcgagcagtcgctcgcccaggcctacagccgc
aacgtcgaaccggaccgccgggtggaggtgcaccttgacccggtgagcggcgaactcgaa
gtgctgattgtgcgcgaggtggtcgagaaggtcgaggacgagaacctccaaatctcactc
gcggacgccctcgaactcgaccctggcgtcgagatcggcatggagatggagttcccggtc
gaccgtgagaagttctcccggatcgccctccaagccgccaagcaaaccctgacgcaaaag
atgcgcgagaccgagcgcaacgtggtctacaacgagtacaaggaccgcgagggccaggtg
ctcacggcgcaggtcgtccgctccgacaacaaaggcaactggtttgtggagctgggcgcg
ggtgaggcgattttgccgccccgcgagcagatcccgggtgaaaagctggtgcccggcaac
cgtgtcaagatctacctcaaggaagtccgcaagacgcccaaggggccaaccattctggca
agccgtgccgacgagcggctgctggagtacctcctgcggcaggaaattccggaagttgcc
aacggcatcgtcgagatcaaggcgatcgcgcgcgaggcgggacagcgctccaaggtggcg
gtctacagccataaccccaacgtggaccccatcggcgcctgtatcgggcaccgtggcaac
cgcattcaggctgtgaccggcgagctgggccgcgagcgagtggacgtgatcctgtgggac
gcaaatgcgcgcgacttcatccgcaacgccctgtcacctgccaaggtgggcctcatcgag
gtccggcccgatacccgtgaggcgaccgtcacggtcacacccgatcagctctcgctggcc
atcggcaagggcgggcagaacgtgcgcctcgcggccaagctgaccggctttaaaatcgac
ctgcgcgaaaccgccgccattcaggacctcgacgctgccatgcagcaggcgctgcaggag
gagcaggggaacaccgggccaagcagcgctgccgcgtccgccttcgacgcgctcttccgg
gacagcaagtcggtggcgaccgccagcccggacgacgagcaggagtaa
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