Deinococcus geothermalis: Dgeo_1385
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Entry
Dgeo_1385 CDS
T00353
Name
(GenBank) ABC transporter related protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
dge
Deinococcus geothermalis
Pathway
dge02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dge00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dgeo_1385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dge02000
]
Dgeo_1385
Enzymes [BR:
dge01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Dgeo_1385
Transporters [BR:
dge02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Dgeo_1385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA
AAA_30
AAA_22
AAA_25
RsgA_GTPase
AAA_24
AAA_29
ABC_ATPase
TsaE
Zeta_toxin
NACHT
AAA_23
NB-ARC
AAA_21
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ABF45680
UniProt:
Q1IYK4
LinkDB
All DBs
Position
1466747..1468549
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AA seq
600 aa
AA seq
DB search
MLSRPPKRDPRQLARLLAFARPYQGLFVLGVFATLLASGLNLVFPLLFGRLIDASFLKVG
SMDTGPLDRTVALLLGIFALSACFGAAQAYLLSTVGSGVVADLRRTLFSHLLSLSPQFFT
AHKTGDLTSRLTSDVSTVQAVSSTALAQLFSQVVALVGSVVLLVLTSPRLSLLTLAVIPL
VIGTAVVLGRRLRRVARQLQDTIAAANADAAEALGGVRVVQSFTAEQLERERYRAGMHRA
FQVSLRRNRLQALMTGTLSFLTFGALAVVLWYGGRQVMAGALTPGKLVTFLIYALQVGGS
VAGLTGLFNQFQEALGASSRIFELLDERSDLPEPAVPVRLGRAEGRVTFDHVSFQYGSVP
TLRNVSVDVPPGQVVALVGPSGAGKTTLVNLIPRFWDVTGGVLQVDGRDVRDYALADLRA
QIGLVPQETLLFSGSIEENIRYGRPEATPEEVRSAARAANADAFIMAFPEGYATVVGERG
VKLSGGQRQRVAIARALLKDPRILILDEATSALDNESEALVQAALDTLMQGRTTFVIAHR
LSTIRNAGRILVLDAGEVVEDGTHEELMAAGGLYRDLYELQFRQEQAAQAERGQGSGTPA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccgtcctcccaaacgtgacccccggcagctcgcgcggctgctggccttcgcg
cggccttaccaggggctgtttgtgctgggcgtcttcgccacgctgctggccagcgggctg
aatctggtgtttccgctgctgtttgggcggctgatcgacgcttcctttctaaaggtaggc
agcatggacaccgggccgctggaccgaaccgtggcactgctgctggggatcttcgcactt
tcggcctgctttggagcggcgcaggcctatctgctttcgacggtggggtcgggtgtggtg
gccgacctgcgtcgcacactgttctcccatctgctctcgctctcgccgcaatttttcaca
gcacacaagacgggcgacctgaccagccgtctcacatcggacgtcagcacggtacaggcc
gtgtcgagcaccgcactggcccagctgttcagccaggtggtggcgctggtaggcagcgtg
gtcctgctggtgctgaccagcccgcgcctcagcctcctgacgctggctgtgattccgctg
gtgatcggcaccgccgtcgtgctgggccgccgcctgcgccgggtggcccgccagcttcag
gacaccattgcggccgccaatgccgacgctgccgaggcgcttggcggcgtgcgggtggta
cagagctttaccgccgagcagctggaacgcgaacgttaccgtgccggcatgcaccgcgcc
tttcaggtgtccctgcggcgcaaccgcctccaggcgttgatgacgggcacgctgagcttc
ctgacgttcggcgcgctcgcggtcgtgctgtggtacggcgggcggcaggtgatggcgggc
gccctcacgcccggcaagctcgtcacgttcctgatctatgccctgcaggtaggcggcagc
gtggcaggcctgaccggtctcttcaaccaatttcaggaagcgctaggcgcgtccagccgc
attttcgagctgctcgacgaacgcagcgacctgcctgagcctgccgtaccggttcggctg
gggcgcgcggagggccgcgtcaccttcgaccacgtgtcttttcagtacgggtccgtacct
acgctgcgaaatgtgagtgttgacgtcccccccgggcaggtggtcgcgctcgttgggcca
agtggagcgggcaagaccaccctggtgaacctgattccgcgcttttgggacgttaccgga
ggtgtcctgcaggtggacggacgggacgtccgcgactatgccctggccgatctgcgcgcc
caaatcggactggttcctcaggaaacgctgctcttttccggctcgatcgaagagaacatc
cgctacggcaggccggaggcgaccccagaggaggtgcggtctgccgcccgcgccgccaac
gcagacgcctttatcatggcctttcccgaaggctacgcgaccgttgtgggcgagcgcggc
gtgaagctctcgggcggacagcgccagcgggtcgccatcgcccgcgcgctcctcaaggac
ccccgcatcctgattcttgatgaggcgacaagcgccctcgacaacgaatccgaagcgctg
gtacaggctgccctcgacacgctgatgcaaggccgcaccaccttcgtgatcgcgcaccgg
ctgagcaccatccggaacgcgggccgcatcctcgtgctggacgccggggaagtcgtggag
gacggcacccatgaggaactgatggcggcgggcggcctctaccgcgacctgtatgaactc
cagttccggcaggagcaagcggcgcaggcggaacggggtcaggggtcaggaacgcccgcg
tag
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