Deinococcus geothermalis: Dgeo_1666
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Entry
Dgeo_1666 CDS
T00353
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dge
Deinococcus geothermalis
Pathway
dge03030
DNA replication
dge03410
Base excision repair
dge03420
Nucleotide excision repair
dge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dgeo_1666
03410 Base excision repair
Dgeo_1666
03420 Nucleotide excision repair
Dgeo_1666
03440 Homologous recombination
Dgeo_1666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dge03032
]
Dgeo_1666
03400 DNA repair and recombination proteins [BR:
dge03400
]
Dgeo_1666
Enzymes [BR:
dge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dgeo_1666
DNA replication proteins [BR:
dge03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Dgeo_1666
DNA repair and recombination proteins [BR:
dge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Dgeo_1666
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dgeo_1666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
Taq-exonuc
5_3_exonuc_N
5_3_exonuc
TraI_hel_assoc_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABF45961
UniProt:
Q1IXS3
LinkDB
All DBs
Position
1770264..1772987
Genome browser
AA seq
907 aa
AA seq
DB search
MTASSPDTLVLIDGHALAYRSYFALPPLHNSRGEATHAILGFLRHTLRLARQASNQVIVV
FDPPGGTFRHAQYGGYKSGRAQTPADLPAQINRIRDLVDALGWPRLEEPGFEADDVIGTL
TKMAEGKGFQVRIVTSDRDAYQLLDEHVRVLASDFSLVGPEDVLAKYGVTVGQWVDYRAL
TGDASDNIPGAKGIGPKTAARLLQEYGTLDAVLAAARAGTLEPKGTREKLLASEADVLFS
RELSCMVTDLPLKVDLGAPRGPGDPARLEALLDELELASLKKDVLGLTRGTLAPGPDAPG
SSETFQLPAIAEWRTPGPDVTWGYVLSREDDLTADLIAAATFDGQVARVAPVEERASHTA
EAVAVLDAAAPEGPLFGDPPAAAPRKLSKKAQQAAERAAQKAAERRAALFPPIVSEAEFV
GQREVTAAGAKALAAHLSVRGTVVEPGDDPLLVAYLLDPANTNMPIVAERYLRTTWPEDA
ATRAAITYRLLQDLPPHLDEARRKLYEEVEKPLSAVLKRMEVRGVRLDSDYLRGLSEALA
GRIATLEAEIHRLAGREFAIRSRDQLETVLYDELGLASGKKTKLTGKRSTAVSALEPLRN
EHPIIPALLEYRELEKLRGTYLDPLPNLVNPRTGRLHTTFSQTTAATGRLSSLNPNLQNI
PIRSELGREIRKGFIADEGYCLISADYSQIELRLLAAIADDPLMQQAFREGADIHRRTAA
QVLGLAEDAITPNQRRAAKTVNFGVLYGMSAHRLSNELGIPYAEAAQFIDVYFNTYPGIR
RYIERTLDFGREHGYVETLYGRRRYVPELKSQNRVIREAGERLAYNMPIQGTAADIIKIA
MVRLDQELDALGARLLLQVHDELLIEAPATQADRVAALTREVMEQAAHLSVPLAVEVGTG
PNWYDTK
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctcctctcccgacacgctggtgctgattgacgggcacgcgctggcgtaccgt
tcgtacttcgcgctgccgccgctgcacaacagccggggcgaggcgacccatgcgattctg
ggctttctgcgccacacgctgcgcctggctcggcaggcgtccaaccaagtcatcgtggtg
ttcgatccgccggggggaaccttccgccacgcgcagtacggcggctacaagtcgggtcgc
gcgcagacccctgccgacctccccgcccaaatcaaccgtatccgcgacctcgtggacgcg
ctgggctggccgcggctagaggagccggggttcgaagccgacgacgtgatcgggacgctg
accaaaatggccgagggcaaaggctttcaggtgcgcatcgtcaccagtgaccgcgacgcc
taccagctcctcgatgagcacgtgcgggtgctcgccagcgacttctcgctggtcggtccg
gaggacgtactggccaaatacggcgtgacggtggggcagtgggtggactaccgcgccctc
acgggcgatgccagcgacaatatccccggcgcgaagggcatcgggccaaagacggcggcc
cggctgctccaggaatacggcacgctggacgcggtattggcggcggcacgggcgggcacc
ttggaacccaagggcacccgcgagaagctgctggcctccgaggccgacgtgctgttcagc
cgcgagctgtcctgcatggtgacggacctcccgctgaaggtggacctcggcgcgccgcgc
ggccccggtgatccagcgcggctggaagcgctgcttgacgagctggaactcgcctcgctc
aaaaaggacgtgcttggcctcaccaggggaacgctggcacctgggccagacgcccccggc
agctcggagaccttccagctcccggccatcgcggagtggcgcactcctggaccagacgtc
acctggggctacgtgctctcgcgtgaggacgacctgaccgccgacctgatcgcggcggcg
accttcgatggccaggtggcgcgggtggccccggtggaggagcgcgcgagccacacggcg
gaggcggtggcggtgctggatgcggcggcaccagaaggccccctcttcggcgacccgccg
gccgcagcacctcgcaagctcagcaagaaggcgcagcaggccgccgagcgggccgcacag
aaggcggcagaacgccgggcggccctcttcccccccatcgtcagcgaggcggaattcgtc
gggcagcgggaagtcacggcggcgggagccaaggcgctggcggcacacctcagcgtgcgc
ggcaccgtggtcgagccgggggatgaccccctgttggtcgcctacttgctcgacccagcc
aacaccaacatgcccattgtcgcggagcgttacctgcgcacgacctggccggaggacgcc
gcgacccgtgcggccatcacctaccgcctgctgcaagacctccccccgcacctcgacgag
gcccgccgcaagctctatgaggaggtggaaaagccgctgtctgccgtgctcaagcgcatg
gaggtgcgcggcgtgcggcttgacagtgactacctgcgcggcctctcggaagccctggcg
ggccgcatcgccacgctggaagccgagattcaccggctggcaggccgcgagttcgccatc
cgcagccgcgaccaactcgaaacggtgctgtatgacgagctgggcctggccagcggcaag
aagaccaagctgaccggcaagcgctccaccgccgtctcggccctcgaaccgctgcgcaac
gaacatcccatcatccccgccctcctggaataccgcgagctggaaaagctgcgcggcacc
tacctcgatccccttcccaacctggtgaacccacgcaccgggcgcctgcacaccaccttc
agccagacgactgccgccactggccgcctcagcagcctcaaccccaacctccagaacatt
ccaatccgctcagaactgggccgcgagattcgcaagggctttatcgcggacgaagggtac
tgcttgatcagcgccgactactcgcagatcgagctgcggctgctggcggcgattgctgac
gacccactcatgcagcaggccttccgcgagggggccgacattcaccgccgcaccgccgcc
caggtgctgggactggcggaagacgcgatcacccccaaccagcgccgcgcggccaagacc
gtcaatttcggcgtgctgtacggcatgagtgcccatcgcctcagcaacgagttgggcatt
ccctacgcggaggcggcccagttcatcgacgtgtacttcaacacctatcccggcatccgc
cggtatatcgagcggacgctggacttcgggcgtgagcacggctatgtcgagacgctctat
ggccgtcgccgctacgtgcccgaactgaagtcgcagaaccgcgtcatccgtgaggcgggc
gagcggctggcctacaacatgccgattcaaggcaccgctgccgacatcatcaagatcgcg
atggtgcgtctcgaccaggaactcgacgcgctgggtgcgcggctgctgctgcaagtccac
gacgaactgctcatcgaggcccctgcgacccaggccgaccgggtcgccgcgctgacccgc
gaggtgatggagcaggccgcacacctcagcgtgccgctggcggtggaggtcggcaccggg
ccaaactggtacgacacgaagtaa
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