Deinococcus geothermalis: Dgeo_1746
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Entry
Dgeo_1746 CDS
T00353
Name
(GenBank) alpha amylase, catalytic region
Organism
dge
Deinococcus geothermalis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CarboxypepD_reg
DUF4998
fn3
CarbopepD_reg_2
GHL6
Motif
Other DBs
NCBI-ProteinID:
ABF46041
UniProt:
Q1IXJ3
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Position
1852512..1855577
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AA seq
1021 aa
AA seq
DB search
MKRFQKVGRSGALAVLTLALSACGVLKAPETGGNTRAWQDEVIYFAMTDRFANGNPANDN
GPNRNEGDRADRTNPLGWHGGDFAGLKAKIEEGYFKRMGFTALWISPVVLQVPAIEGPKT
GPNAGKLFAGYHGYWAEDFFKVDPHFGTLDEYKSLIQTAHRNGIKVIQDIVVNHAGYGAT
LTKTNPDWFHTQAECDASTNKRVDCPLAGLPDFKQERPEVTTYLNDFVNSWRKETGIDGL
RIDTMQHVPDSYWQQFFAAGGPGDPSKIWSVGEVFNGDPAFLAHYMDDLGSPSVFDFALY
FAIKDGLSSARGDLGRLADVFARDGAYRDPTRLTTFVDNHDVPRFVSEVQERGGTAAQAN
ERLDLALSLIYTSRGTPSVYQGTEIAQPGLGDPYNYATGQGNREDMNFGALSQSSIDERL
AALAAARAKYRALTHGVQQELWRPNGGAPIFAYRRIVTDGQGGQPVVVVINNGDTPVDLS
TLSGGGIPLLGTFSGTALTEITGRTSDLSVSGGQLVGTVPARSALAVTAPAGSGSTGTVN
PRLPEVTDLSAKAGDSAVQLTWTASTDLNVTGCRVYARTGSGQERLLNFAPLPKDQTTYL
AAGIPNDQETTFRVVTVDAQGAESRGVSVKATLSSKNTVRVTFTVDARSQGNGPIELRRF
DTGSQLEYPMTQVSRGIWKTAIDLPLFREIKFKFGNDGPAAKNSGYEAPGQPDRSYVVGT
NPNVYTGTYDFITQPVPQTTIEGQVRGAGNPLANALVEAVTANPDLHYAMTFPDGTYTLF
VPAGTHTLQAKAGGYVAASRQAISPGTGADFNLAQDLSTKYTIDGNLADWTAPKVTLQSP
TEGGFGPDNNWLTLQADSDDHYLYLAYTYRVKGNSAILYLDTKMGGAAQADNFEAWKRAA
TFSGSMGGADAFVARYENQMAQLRLVQSDTATPEVNTGDYKFAASGTLPEQTVELAIPWT
ALGLSEKPANGVNVVGGIFGGDGYGAGDIVPNTTSTPPGANTIGTDAEQRRATFTQPLNV
R
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtttccagaaggtgggtcgcagtggcgccctggccgtccttacgttggctctg
tccgcctgtggcgtcttgaaggcgcccgagacgggaggcaacactcgtgcctggcaggac
gaggtgatctacttcgccatgaccgaccgcttcgccaacgggaacccggccaacgacaac
ggcccgaaccgcaatgagggcgaccgggccgaccggaccaacccgctcggctggcacggc
ggcgacttcgcggggctgaaggcgaagatcgaggagggctatttcaagcgcatgggcttt
acggccctctggatcagcccggtggtcctgcaggttccggccatcgagggcccgaagacc
gggccgaacgccgggaagctctttgcgggctaccacggctactgggccgaggactttttc
aaggtagacccacacttcggcacgctggacgagtacaagtccctcatccagactgcgcac
aggaacggcatcaaggtgattcaggacattgtggtcaaccacgcgggctacggcgccaca
ctcaccaagaccaatcctgactggtttcacacccaggctgaatgcgacgccagcaccaac
aaacgggtggactgtccgctggcgggcctgcctgacttcaagcaggagcggcccgaggtc
acaacgtacctgaacgacttcgtgaactcctggcgcaaggaaaccggcatcgacgggctg
cggatcgacaccatgcagcacgtccctgacagctactggcagcagttctttgccgcgggt
gggccgggggacccttccaagatctggtcggtcggcgaggtgttcaacggtgatccggcc
ttcctggcccactatatggatgatctcggatcgcccagcgtgttcgatttcgcgctgtac
ttcgccatcaaggatggcttgtcgagtgcgcgcggcgacctaggacgcttggccgacgtg
ttcgcgcgggatggtgcgtaccgggaccccacacggctgaccaccttcgtggacaaccac
gacgtgccccgcttcgtgagcgaggtgcaggagcgcggcgggacagcggcgcaggcgaac
gagcgccttgacctggccctcagtctgatctatacctcgcgcggcacaccgagcgtgtac
cagggcacggagatcgcgcagccgggcttgggcgacccctacaactacgccaccggccaa
ggcaaccgcgaggacatgaacttcggggccctctcgcagagcagtatcgacgagcggctg
gcagctctcgccgcggcacgcgcgaagtaccgggcactcacacatggcgtgcagcaggag
ctgtggcggccaaacggcggggcgcccatcttcgcctaccgccggattgtcacggatggt
caaggcggacagcccgtcgtcgtcgtgatcaacaacggcgacacgcccgtggacctctcc
actctgagcgggggcggcattccgctgctggggaccttcagcgggacggcgctgacagaa
attaccgggcgaaccagcgacctgagcgtgagcggcggccaactcgtaggcacggttcct
gcccgctccgcgcttgctgtcacggccccggcgggcagcggcagcacaggcacggtgaac
cccaggctgccggaggtgacggatctcagtgcgaaggccggagacagcgccgtgcagctc
acgtggacggcctccacggacctgaacgtcaccggctgccgcgtctacgcccgcaccggg
agcgggcaggaacggctcctcaacttcgcgccgctgcccaaggaccagaccacgtacctc
gccgcaggcattccgaacgaccaggaaacgaccttccgggtggtcacggtagacgcgcag
ggcgccgagagtcggggcgtcagcgtcaaggccacgctcagcagcaagaacacggtcagg
gtgactttcacggtggacgcccgcagccagggcaacggcccgatcgagctgcgccgcttc
gacacgggctcgcagcttgagtaccccatgacgcaggtgagccgcggcatctggaagacg
gcgattgacctccccctcttccgcgagatcaagtttaagttcggcaacgacggacccgcc
gccaagaacagcggctacgaggcacccggccaacccgaccgcagctatgtggtgggaaca
aatcctaacgtctacaccggcacctatgactttattacccagccggtgccgcagaccacc
atcgagggccaggtcagaggagcaggcaatcccctcgcgaatgcgttggtcgaagcggtg
accgccaaccccgacctgcactacgcgatgacctttccggacggcacatacacactgttt
gttccggcagggacccacacactgcaggccaaggcaggcggctacgtagcagccagccgg
caggcgatctcgccggggacgggcgcagacttcaacctggcccaggacctgagcaccaag
tacaccatcgacggcaacctggccgactggacggcccccaaggtgacgctgcaaagcccg
accgagggaggcttcgggcccgacaacaattggttgacactccaggccgacagtgatgac
cactatctgtacctcgcgtacacgtaccgggtgaagggaaacagcgcgatcctgtacctg
gacaccaagatgggcggtgcggcccaagccgacaatttcgaggcttggaagcgggcggcg
accttcagtgggagcatggggggcgccgacgcctttgttgcgcggtacgaaaaccagatg
gctcaactgaggctggttcagagcgatactgccacgcccgaggtcaacacgggcgactac
aagtttgcagcgagcggtaccctgcccgagcagacggtggaactggcaatcccgtggaca
gcactcggcctcagcgaaaaacctgcgaacggtgtgaacgtggtgggtggaattttcggt
ggcgacggctacggcgcgggcgacatcgtgcccaataccaccagtacaccccccggtgcc
aacaccattggaacggatgccgaacagcgccgggcaaccttcactcagcccctcaacgtg
aggtaa
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