KEGG   Deinococcus geothermalis: Dgeo_2012
Entry
Dgeo_2012         CDS       T00353                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dge  Deinococcus geothermalis
Brite
KEGG Orthology (KO) [BR:dge00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dge02048]
    Dgeo_2012
Enzymes [BR:dge01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Dgeo_2012
Prokaryotic defense system [BR:dge02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Dgeo_2012
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII RE_TaqI
Other DBs
NCBI-ProteinID: ABF46306
UniProt: Q1IWS8
LinkDB
Position
complement(2119917..2123057)
AA seq 1046 aa
MAFLSEAEVENALLDQLRALGYSIEREEDIGPDGHRPERESHDEVVLRKRFEDAVARLNP
GVPLEARHDAVRRVTQSELPSLLAENRRLHKLLTEGVDVEYYADDGVLTAGKARLIDFDD
PANNDWLAVNQFVVINGQYQRRPDVVVFVNGLPLAVIELKAPGNDQATLTGAFNQLQTYK
GEITQLFRTNALLVTSDGISARVGSLSADFERFMPWRTTDGREVAPKGAPELETLIEGVF
EHRRLLDLLRHFTVFGETGAGLIKIIAGYHQFHAVRHAVERTVAASSAGGDRKAGVIWHT
QGSGKSLLMAFYAGLLVRHPALENPTLVVLTDRNDLDDQLFATFSMCRDLIRQTPVQAEG
REHLKTLLDRASGGVIFTTLQKFGEIDGPLTTRRNVVVIADEAHRSQYGFKAKVDAKTGE
ISYGFAKYLRDALPNASFIGFTGTPIEAGDVNTPAVFGHYIDIYDISRAVEDGATVPIYY
ESRLARIELDEDEKPKIDAEIEEILEDEEEPARERAKQKWATVEALVGADKRLRLIAQDI
VQHFEARVAALDGKAMIVCMSRRICVKLYNEIVKLRPGWHSDDDNAGAVKIVMTGAASDP
PEWQKHIGNKARRDLLARRARDPKDPLKLVIVRDMWLTGFDAPCMHTMYVDKPMRGHGLM
QAIARVNRVFRDKPAGLIVDYIGIAQNLKNALAQYSPRDRENTGIDEAEAIAVMLEKYEV
VRDMFHGFDYRSGLNGSPQERLAMMAGAIEWILERQQQWAAQETTPEGKKAAHRRFGDAV
LALSKAYALASASDPARAIREEVGFFQAIRAALIKSSTGSDANPQAREWAIQQIVSRAVV
STEIVDILTAAGIKSPDISILSDDFLAEVQQMEKKNLALEALRKLINDGIRSRAKANVVQ
TRAFSQRLEDAVARYHANAITTAEVLQELIHLAKDIRAARQRGEESGLSDEEIAFYDALA
ENESAVQVMGDEKLRVIAHELLVNLRENVSVDWAHRESARARLRVLVKRILRKYGYPPDL
QDAAVQTVLQQAEALSAVWSLARNSG
NT seq 3141 nt   +upstreamnt  +downstreamnt
atggcatttctgtcggaagccgaggtcgaaaacgcccttctggatcagctgcgcgcgctc
ggctacagcatcgaacgcgaggaggacatcggccccgacggccaccggccggagcgcgag
agccacgacgaggtggtgctgcgcaagcggttcgaggacgccgttgcccgcctgaacccc
ggggtgccactggaggcgcgtcatgatgccgtgcggcgcgtgacgcagtccgagctgcca
tcgttgcttgcagaaaaccgccgcctgcacaaactgctgaccgaaggcgtggatgtggag
tactacgcggacgatggcgtgctcaccgccggcaaggcgcggctgatcgacttcgatgac
ccggccaacaacgactggctggcggtgaaccagttcgtcgtcatcaacgggcagtaccag
cggcgacccgatgtcgtggtgttcgtgaacggcttgccgcttgcggtgatcgagctcaag
gcgccgggcaacgaccaagccacgctcacgggcgcgttcaaccagttgcagacctacaag
ggggagatcacccagctttttcgcaccaacgcactgctggtcacgtcggacggcatttcc
gctcgggtggggtcgctgtcggccgacttcgagcgcttcatgccgtggcgcaccaccgac
ggtcgggaggtggcgcccaagggagcgccggagctggagacgctgatcgaaggcgtgttc
gaacatcgccgcttgctcgatctgttgcgtcacttcacggtcttcggcgaaacaggcgct
gggctcatcaagatcatcgcgggctaccatcagttccacgcggtacgacatgcggtcgag
cgcacggtggccgcatcctctgccgggggagacagaaaggccggggtgatctggcatacc
cagggctcgggcaagagcctgttgatggcgttctacgcaggtcttctcgttagacacccg
gcgctggaaaacccgaccctggtcgtgctgaccgatcgcaacgacctggacgatcagctc
ttcgccaccttttcgatgtgccgcgacctgatccggcagacgccggtgcaagcagaggga
cgcgagcacttgaaaacgctgctggaccgggcctcgggcggggtgatcttcacgacgctg
caaaagtttggcgagatcgacgggccactgaccacccggcgcaacgtggtggtcatcgcc
gacgaggcgcaccgcagccagtacggcttcaaggccaaggtggatgccaagacgggcgag
atctcctacggcttcgccaagtacctgcgagacgcgctgccgaacgcctcgttcatcggc
ttcaccggtacgcccatcgaggcaggcgacgtgaacaccccggcggtgttcggccactac
atcgacatttacgacatcagccgcgcggtggaagacggcgcgacggtgcccatctactac
gaatcgcggttggcgcgcattgaactcgacgaggacgaaaagccgaagatcgacgccgag
atcgaggagattctggaagacgaggaagaacccgcccgcgagcgcgccaagcagaagtgg
gcgacggtggaggcgctcgttggcgcggacaagcgcctgcgactgatcgcccaggatatc
gtgcagcacttcgaggctcgcgtagccgcgctggacggcaaggcgatgatcgtctgcatg
agccggcgcatctgcgtcaagctctacaacgagatcgtgaagctgcgtcccggatggcac
agcgatgacgacaacgccggggccgtcaagatcgtgatgaccggggcggcctccgatccg
cccgagtggcagaagcatatcggcaacaaggcacggcgcgatctgttggcccgccgcgcc
cgcgaccccaaagaccccttgaagctcgtcatcgtgcgcgacatgtggctgacgggcttc
gatgcgccgtgcatgcacaccatgtatgtggacaagccgatgcgcggccacgggctgatg
caggcgattgcgcgggtgaaccgggtgtttcgcgacaagcccgccgggctgatcgtggac
tacatcggcattgcgcagaacctcaaaaacgcgcttgcgcagtactcgccgcgcgaccgc
gaaaacaccggcatcgacgaagccgaagccatcgcggtaatgctggaaaaatacgaggtc
gtgcgcgacatgttccacggctttgactaccgctcgggtctcaacggttcgccccaggag
cggctggcaatgatggcgggggccatcgagtggatcctggagaggcagcagcagtgggcg
gcgcaggaaaccaccccggaaggcaagaaggccgcgcaccggcgctttggcgatgcggtg
ctggccttgtccaaggcgtatgccttggcttccgcctcggacccggcgcgtgctatccgc
gaagaggtggggtttttccaggcgatccgtgccgcgctgatcaagagcagcacgggctcc
gacgcaaacccgcaagcgcgcgagtgggccatccagcagatcgtcagtcgcgcggtggtc
tcgaccgagattgtcgatatcctaactgccgcgggcatcaagagtccggacatctccatt
ctgtccgacgacttcctggccgaagtgcagcagatggagaaaaagaacctggcgctggaa
gccctgcgcaagctcatcaacgacggcatccgctcacgcgccaaggccaacgtcgtgcag
acccgtgcgttttcgcagcggctggaggatgccgttgcacgctaccacgccaacgccatc
accaccgccgaggtgctgcaggagctgatccacttggccaaagacatccgcgcggcgcgc
cagcgtggcgaagagtctggattgtccgacgaggagattgccttctacgacgccctggcc
gagaacgaaagcgcggttcaggtcatgggggatgagaagctgcgcgtgattgcccacgag
ctgctggtgaacctgcgcgaaaacgtctccgtggactgggcccaccgtgaatcggcccgc
gctcgcctgcgcgtgctggtcaagcgcatcctgcgcaagtacggttacccgcctgatttg
caggacgcggcggtgcagacggtgctgcagcaggccgaggcactgtcggcggtgtggagt
ctggctcgtaactctgggtag

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