Deinococcus geothermalis: Dgeo_2135
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Entry
Dgeo_2135 CDS
T00353
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dge
Deinococcus geothermalis
Pathway
dge03030
DNA replication
dge03430
Mismatch repair
dge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dgeo_2135
03430 Mismatch repair
Dgeo_2135
03440 Homologous recombination
Dgeo_2135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dge03032
]
Dgeo_2135
03400 DNA repair and recombination proteins [BR:
dge03400
]
Dgeo_2135
Enzymes [BR:
dge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Dgeo_2135
DNA replication proteins [BR:
dge03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Dgeo_2135
DNA repair and recombination proteins [BR:
dge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Dgeo_2135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
AAA_5
AAA_14
DNA_pol3_gamma3
Mg_chelatase
AAA_16
nSTAND3
GntR
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ABF46429
UniProt:
Q1IWF5
LinkDB
All DBs
Position
complement(2247488..2249701)
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AA seq
737 aa
AA seq
DB search
MSALYQRARPINWDQVVGQEHVKDVLKAALEQGRVGHAYLFSGPRGVGKTTTARLIAMTA
NCTGPSPKPCGECESCLAVRNGSHPDVLEIDAASNNSVDDVRDLREKVGLAAMRGGKKIY
ILDEAHMMSRAAFNALLKTLEEPPAHVIFILATTEPEKIIPTILSRCQHYRFRRLTPEEI
AGKLADLAEREGVRAEPEALNLIGRLADGAMRDGESLLERMLAAGTAVTRVSVEEALGLP
PSERVRGIAAALVQGDAGMALTGAAELYRAGFAARTIVEGLVAACAEALHAELGLEGAGL
EGADVPRLLRLQAALDEQEARFARSADLLSLELALTHALLAADAGGGGGMVGAAAPASLP
ADVAQRLNRLEKEVASLRMSGTRPAPANEVPAFEPGKRRGGPAGEAPARAETPAPMPAAV
QGSWDDVVKAASMQLKAFIKTAQKHSEPGYVSLTYEARWKFHARQVMDKWDELSAHVLKV
FGPVTLEVIPPEGQGRKAQLGGRGPDGGGGGPAPAVPFGTAAPLAQSRPTPEIPAFEPAA
RSRASRGPAFAPLKTAPPERAAAPPLPTGAVTAPLDAPALRPAPPPSPDDVAPAPLPDAA
PWEDQAAELPPPPADAQAGDRLPLPGASRELYLAEPITEEPDWEAIGGEVEGPVPTLEDA
PFADAVPARPATTPRAEARPTAQAEAAPPTRPGDIRAHPMYEEIKKRFSGRVREIGKNRK
PHASAASEESEGEDVEA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccctctaccaacgcgcccgaccgatcaactgggaccaggtggtcggccaagaa
cacgtcaaagacgtgctgaaagcggcgctggagcaagggcgtgtgggccatgcttacctc
ttttcggggccgcgcggtgtcggcaaaaccacgaccgcccgcctaattgccatgaccgcc
aactgcaccgggccgagcccgaagccctgtggcgaatgcgaatcgtgcctggcggtcagg
aacggctcgcatcccgacgtgctcgagatcgacgcggcctccaataactcggttgacgac
gtgcgcgatctgcgcgagaaggtggggcttgcagcgatgcgcggcggcaagaaaatctac
attcttgacgaggcgcacatgatgtcgcgggcggcctttaacgccctgctcaagacgctg
gaggagccgcccgcccacgtgatctttatcctggcgaccaccgagccggaaaagatcatc
ccgaccatcctctcgcgctgccagcattaccgctttcgtcgcctgacaccggaggaaatc
gccggaaaactggcggacctggcggaacgcgaaggcgtgcgggccgagccggaggccctg
aatctgattgggcgcctcgctgacggagcgatgcgcgacggcgagagcctgctggagcgg
atgctggcggcggggacagcggtgacccgggtgagcgtggaggaggcgttgggcctgccg
ccgagcgagcgcgtgcgcggcatcgccgcggcccttgtgcagggcgacgcgggcatggct
ctcaccggagccgccgagctgtaccgagcaggtttcgcggcacgcaccatcgtggagggg
ctggtcgcggcctgtgcggaggccctgcacgctgagctgggtttggagggcgcgggactg
gagggcgcagatgtgccccgcttgcttcggcttcaggccgcgctcgacgagcaggaggcc
cgctttgcccgctccgccgacctgctgagcctggaactggccctgacccacgcgctgctt
gccgccgatgctggtggcggtggggggatggtgggcgcggcggctccggccagccttccc
gccgacgtggcgcagcgcctcaaccgcctagaaaaggaagtggcgagcctacggatgagc
gggacccggcccgctccagccaacgaggtgccggcctttgagccgggcaaacgccgggga
gggcctgccggggaagctccagcccgtgccgagacgccggcgccgatgcccgccgccgtg
caggggagctgggacgatgtggtgaaagccgcgagcatgcagctcaaggcgtttatcaag
acggcgcaaaagcacagcgagccgggatacgtcagcctcacctatgaggcgcgctggaag
ttccatgcccggcaggtcatggacaaatgggacgaactgagcgcccacgtcctgaaagtc
tttggaccggtgacgttggaagtcattccaccggaaggccagggccgcaaagctcagctc
ggtgggcgcggccccgacgggggtgggggagggccggctcctgctgtccctttcggcacg
gctgcccctctcgcgcagagtcggcccacgcctgagattcccgcctttgaacccgctgct
cggtcccgggcgtcgcgtgggccggcgttcgcgcccctgaagacagcgccgcccgaacgt
gccgccgctccgccactgccgaccggtgcggtcaccgctcccctcgacgcccccgcgctc
cgtcccgccccgcctcccagtcccgacgacgtggccccagcgccgctgccggacgctgct
ccctgggaggaccaggccgcggagctcccgcccccaccggcggatgctcaggccggagac
cgcctgcctctgcccggcgcgtctcgcgagctgtacctggccgaaccgatcaccgaggaa
cccgactgggaagccatcggtggtgaggtggaagggccggtgcccacactggaggatgca
cccttcgcggatgccgtgccggcccgcccggccacaacgccccgggcggaggcccgcccc
acggcccaagcggaggccgcgccgcccacccgtcccggtgatatccgcgcccacccgatg
tatgaggagatcaagaaacggttctcgggccgcgtccgcgagatcggcaaaaaccgcaag
ccccacgccagcgccgccagtgaggagagcgagggtgaggacgtggaggcgtag
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