Deinococcus geothermalis: Dgeo_2137
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Entry
Dgeo_2137 CDS
T00353
Name
(GenBank) 2',5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dge
Deinococcus geothermalis
Brite
KEGG Orthology (KO) [BR:
dge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dge03016
]
Dgeo_2137
Enzymes [BR:
dge01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Dgeo_2137
Transfer RNA biogenesis [BR:
dge03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Dgeo_2137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Portal_Mu
Motif
Other DBs
NCBI-ProteinID:
ABF46431
UniProt:
Q1IWF3
LinkDB
All DBs
Position
2251332..2251994
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AA seq
220 aa
AA seq
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MTKIKKTPRPPVQPGATPERGTRTVAPENRTLRLFYALKVPQEVAAPLAEAQRQLRGNWR
PVRPDQLHLTLAYLPAVPPHKVNDLKRLGTALTQDLAPMLLRLRGTGYFPNEGSPRVWFV
KAEAEGLSELANQLRAGIHALGLETEDLPFKAHVTLARKKGPAPRVPPLTFDLGWQVGHV
ALIRSTLRKTGPIYDTVSTFRLRGAASGQPHAIHPSEETP
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagatcaagaagaccccgcgcccccccgtgcagcccggggccacgcccgagcgc
ggaacaagaacggtggcccccgagaaccgcaccctccgcctcttctatgccctcaaggtc
ccgcaggaggtggcggctccccttgccgaggcacagcggcaactacgcggaaactggcgg
cccgtgcgcccggatcagcttcacctcacgctcgcctacctgccagccgtgccgccgcac
aaggtcaacgacctcaaacgcctcggcacagcgctcacccaagatctcgcccccatgctc
ctgcggctgcgcggcaccggctactttcccaacgagggcagcccgcgcgtctggtttgtg
aaggcggaagccgaagggctgagcgagctggccaaccaattgcgcgcgggcattcacgcg
ctgggcctggaaacagaagatcttccgttcaaggctcatgtcacccttgcgcgtaagaaa
ggccccgcaccgcgcgttccccccctgacctttgatctcggttggcaggtgggccatgtg
gccctgatccgcagcaccctccgtaagaccggcccgatctacgacaccgtgagcaccttc
cgccttcggggggcagccagcggccaaccccacgccattcatccctcagaggagacgcca
tga
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