Deinococcus geothermalis: Dgeo_2501
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Entry
Dgeo_2501 CDS
T00353
Name
(GenBank) histone-like protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
dge
Deinococcus geothermalis
Brite
KEGG Orthology (KO) [BR:
dge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dge03032
]
Dgeo_2501
03036 Chromosome and associated proteins [BR:
dge03036
]
Dgeo_2501
03400 DNA repair and recombination proteins [BR:
dge03400
]
Dgeo_2501
DNA replication proteins [BR:
dge03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Dgeo_2501
Chromosome and associated proteins [BR:
dge03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Dgeo_2501
DNA repair and recombination proteins [BR:
dge03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Dgeo_2501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
DUF2780
HU-DNA_bdg
HU-CCDC81_euk_2
DUF2267
HU-CCDC81_bac_2
SSPI
TUNAR
Motif
Other DBs
NCBI-ProteinID:
ABF43935
UniProt:
Q1J3J9
LinkDB
All DBs
Position
pDGEO01:complement(550512..550961)
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AA seq
149 aa
AA seq
DB search
MLPPFTAAPRYVMLLTMTKKSTKAPAKKTAAKAPAQNDAQTGRAGNERGKIAKTQLVDMV
ADKTGLTKKQSEEAVSAMLGVVVDAIKQGKSVGLPGLGTLSVKATAARTGVRPGTSERIQ
IPAGKKVAFKVASTLKSSLGGTDDTAVAE
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
ttgctcccccccttcacggcggcgccaaggtatgtcatgctgctcaccatgacgaagaaa
tcaacgaaagcgcccgccaagaagaccgccgccaaggctcccgcgcagaacgacgcacag
actggccgcgccgggaacgaacggggcaagattgccaagacgcagcttgtggacatggtt
gccgacaagactggcctgaccaagaaacagagcgaggaagccgtcagcgcgatgctcggc
gtggtggtggacgccatcaagcagggcaagagcgtgggcctgcccggcttggggaccctc
agcgtcaaggctaccgctgcccgcaccggtgtgcgccccggcaccagcgaacgcatccag
attcctgcgggtaagaaggtcgcctttaaggtggcgagcaccctcaagtcctcgctgggc
ggcacagacgatacggccgtcgctgaataa
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