Megalodesulfovibrio gigas: DGI_0098
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Entry
DGI_0098 CDS
T02851
Name
(GenBank) putative DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dgg
Megalodesulfovibrio gigas
Pathway
dgg03030
DNA replication
dgg03430
Mismatch repair
dgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DGI_0098
03430 Mismatch repair
DGI_0098
03440 Homologous recombination
DGI_0098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgg03032
]
DGI_0098
03400 DNA repair and recombination proteins [BR:
dgg03400
]
DGI_0098
Enzymes [BR:
dgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DGI_0098
DNA replication proteins [BR:
dgg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DGI_0098
DNA repair and recombination proteins [BR:
dgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DGI_0098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGW12035
UniProt:
T2G627
LinkDB
All DBs
Position
99481..102996
Genome browser
AA seq
1171 aa
AA seq
DB search
MSFVHLHCHTEYSLLDGAIRIRDLVAQAKAHGAPAAAITDHGNLYGALTFYTQCQKEGIQ
PILGCEVYVAGKEIDHTNRDPEHARSRHHLVLLAKNETGWQNLVKLVSIGHLHGFYHKPR
VDLKLLSQYNEGLVALSACLAGAVPRAMLRQGMDAAIQTARDYAAIFPGRFFLEVQANDL
PEQARLNTKLIELADVLKLPLIATNDCHYLTKEDVDAHDVLLCIQTAACVDDPKRMRFET
RDLYFKSPEEMRAAFPHCPEAIENSLRIADMCHVKLDLKSHHFPRYELPEGSTVSEEFQR
LAREGLEFRLKRMPYAVDQEAYRERLETELQVIGGMGFEGYFLIVQDFINWAKDHGIPVG
PGRGSAAGSLVAWALKITNIDPIPYNLLFERFLNPERVSMPDIDVDFCERRRTEVIRYVS
EKYGSDSVAQITTFGTMKAKAVIKDVGRALGMSFAETDRIAKLVPDDLKMTLKKALEQSQ
DLAALQAGDAQIARLLNVSQRLEGLCRHASTHAAGVVIGDRPLSDRLPLYRGKREEIVTQ
FDMKMVEKIGLIKFDFLGLRTMTVIQDTLDSIGRQGAPVPDLDALPLDDAKEETWKLFQR
GETDGIFQVESSGMRKYLRMLKPTCFDDLIAMLALYRPGPLNSGMVDEFINRKHGKVAVT
YPWPSLEECLKPTYGVIVYQEQVMQIAQIVAGYTLGGADLLRRAMGKKNAEEMAKQRAIF
VEGASNNGVPQKTANEIFDLMEKFAEYGFNKSHSAAYALVSYWTAWLKTHYPAEFMAALM
TSELGNQDKLLQYIAACKDMKDAQGRPLEVRPPDVNASRREFSVRENVIFFGLGGVKNVG
DEAINSIVAAREADGPFTSLLDFLIRIDLRKANKRVLESLIKCGALCSLGATERALFESL
EQAVARAQKKAREKDDAIVSLFSLTPATEAPPPMPGVGFDCPEASLPEWPAEILSRYEKE
ALGFFLSNHPLMPFRRQLQRLQLTPLEECRGMSDRRQVRVAAMITSIKEHLTKKGDKMAF
CQIEDLGGSAEATFFPRTYEAVKALLLEEKPLLLTALIDDKDGAAQAQGESSDDDAPSTT
VKLLVEEAKLLELAVAACTEPVRLQLPANRLEHGGLAAFKALLQEHEGDTPVRLRLLLDT
CVCDFELDDRLTVDPTPAFELAMDRFCKGLS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgttcatctccattgccacacggaatactcgctgctggacggcgccatccgg
atcagggatctggtggcccaggccaaggcgcatggcgcgccggccgcggccatcacggac
catggcaacctctatggcgcgctgactttttacacccagtgccagaaggagggcatccag
cccatcctggggtgcgaagtgtatgtggccggcaaggagatcgatcataccaaccgcgat
cccgagcacgcccgcagccggcatcacctggtgctgctggccaagaacgagaccggctgg
cagaatctggtcaagctggtgtccatcggccacctgcacgggttctaccacaagccccgg
gtggacctgaagctgctttcccaatacaatgaaggccttgtggcgctttcggcctgcctg
gccggggcggtgcccagggccatgctgcgccagggcatggacgcggccatccagaccgcc
agggactatgccgccatcttcccgggccgttttttcctggaggtccaggccaacgacctc
cccgaacaggcccggctgaacacgaagctcatcgaactggcggacgtgctcaagctgccg
ctcatcgccaccaacgactgccactacctgaccaaggaggatgtggacgcccacgacgtc
ctcctgtgcatccagaccgccgcctgtgtggacgatcccaaacgcatgcgcttcgagacg
cgggatctctatttcaaaagcccggaggagatgcgcgccgccttcccgcattgcccggaa
gccatcgaaaactccctgcgcattgcagacatgtgccatgtgaagctggacctgaagagc
caccacttcccgcgctacgaactgcccgagggcagcaccgtgagcgaggaattccagcgg
ctggcccgggaaggtctggaattccggctcaagcggatgccctatgccgtggaccaggaa
gcctaccgtgagagactggaaacggagctgcaggtcatcggcggcatgggcttcgagggc
tacttcctcatcgtgcaggatttcatcaactgggccaaggaccacggcattcccgtgggg
ccggggcgcggctcggcggccggctcgctggtggcctgggcgctgaagatcaccaacatc
gatcccatcccgtacaacctgctgtttgaacggtttctgaatcccgaacgcgtgtccatg
cccgatattgacgtggatttctgcgaacgccggcgcacggaggtcatccgctacgtcagc
gagaaatacggcagcgattccgtggcgcagatcaccaccttcgggaccatgaaggccaag
gcggtcatcaaggacgtgggccgggcgttgggcatgagctttgcggagacggaccgcatt
gccaagctcgttcccgacgatctgaagatgaccctcaagaaggccctggagcaaagccag
gatctggccgccctgcaggccggggatgcgcagattgcccggctgctcaatgtctcgcag
cggctggagggcctgtgccgccacgcctccacccatgccgcgggcgtggtcatcggcgac
cggcccctgtcggaccgcctgcccctgtaccgcggcaagcgcgaggaaatcgtcacccag
ttcgacatgaagatggtcgagaaaatcggcctcatcaagttcgatttcctgggcctgcgc
accatgaccgtcatccaggacaccctggacagcatcggccgccagggcgcgcccgtgccg
gatctcgacgccctgcccctggacgacgccaaagaggaaacctggaagctctttcagcgc
ggggagacggacggcatcttccaggtggaatcctcaggcatgcgcaagtacctgcgcatg
ctcaagcccacctgctttgacgatctcatcgccatgctggccctgtaccggcccgggccg
ctgaactcgggcatggtggatgaattcatcaaccgcaagcacggcaaggtggccgtcacc
tatccctggcccagcctggaggagtgcctcaagcccacgtacggcgttatcgtgtatcag
gaacaggtgatgcagattgcgcagatcgtggccgggtacaccctgggcggcgcggatctg
ctgcgccgggccatgggcaagaaaaatgccgaggagatggccaagcagcgggccatcttt
gtggaaggcgcgtccaataatggcgtgccccagaaaacagccaacgaaattttcgacttg
atggaaaagtttgcggagtacggcttcaacaagtcccactccgcggcctatgccctggtt
tcgtactggacggcctggctcaagacgcactacccggccgagttcatggccgccctgatg
acctcggaacttggcaaccaggacaagctgctgcagtacatcgccgcctgcaaggacatg
aaggacgcccagggccggcccctggaggtgcgcccgccggacgtgaacgcctcgcgccgg
gaattttccgtgcgagagaacgtcatcttcttcgggctgggcggggtcaagaacgtgggg
gacgaagccatcaactccatcgtggccgcccgcgaggccgacgggccgttcaccagtctg
ctggatttcctcatccgcatcgacctgcgcaaggccaacaagcgcgtgctggaaagcctg
atcaagtgcggggccctgtgcagcctgggcgccaccgagcgcgcgctgttcgagtccctg
gaacaggccgtcgcccgggcccagaaaaaggccagggagaaggacgacgccatcgtttcc
ctcttctccctcaccccggccacggaagcgccgccgcccatgcccggcgtggggttcgac
tgccccgaggcctccctgccggagtggccggcggaaatcctttcccggtacgaaaaggag
gcattgggcttctttttgtccaaccatccgctcatgcccttccgccgccagttgcagcgc
ctgcaactcacgcccctggaggagtgtcgcggcatgtcggaccgtcgccaggtgcgcgtg
gcggccatgatcacctccatcaaggagcacctgaccaaaaagggcgacaagatggccttc
tgccagatcgaggatctgggcggctcggccgaggccaccttcttcccccgcacctacgag
gccgtgaaggccctgctgctggaggaaaagcccctgctcctcaccgccctcattgacgac
aaggacggcgccgcccaggcgcagggcgaatcgtccgatgacgacgcaccctcgaccacc
gtaaaactcctggtggaggaagcgaagctcctggaactggccgtggccgcctgcaccgag
cccgtgcgcctgcagttgcccgccaaccggctggagcacggcggcctggccgccttcaag
gccctgctccaggaacatgaaggcgacacccccgtgcgcctgcggctgctgctggacacc
tgcgtctgcgactttgaactggacgatcgcctgaccgtggaccccaccccggccttcgaa
ctggccatggaccgattctgcaaaggactttcctga
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