Megalodesulfovibrio gigas: DGI_0117
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Entry
DGI_0117 CDS
T02851
Symbol
rnc
Name
(GenBank) putative ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dgg
Megalodesulfovibrio gigas
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgg03019
]
DGI_0117 (rnc)
03009 Ribosome biogenesis [BR:
dgg03009
]
DGI_0117 (rnc)
03036 Chromosome and associated proteins [BR:
dgg03036
]
DGI_0117 (rnc)
Enzymes [BR:
dgg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DGI_0117 (rnc)
Messenger RNA biogenesis [BR:
dgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DGI_0117 (rnc)
Ribosome biogenesis [BR:
dgg03009
]
Eukaryotic type
90S particles
RNase
DGI_0117 (rnc)
Prokaryotic type
rRNA processing factors
DGI_0117 (rnc)
Chromosome and associated proteins [BR:
dgg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DGI_0117 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AGW12054
UniProt:
T2G7A5
LinkDB
All DBs
Position
complement(120208..120891)
Genome browser
AA seq
227 aa
AA seq
DB search
MFQHRIHYPFREVKLLDQALTHSSWANEHGGKWPHNERLEFLGDAVLELCVTQELFERFP
HVREGELTRMRSRLVSQPALSGLAREIGLETCLRLGKGEESQGGRDRASLLADAMEAVIG
AVFLDGGFEAVRTFLRALFAERWPADVERKKEKDYKSHLQELTQRLYRERPGYALLEAAG
PEHAKVFAVLLTLPTGETVTAQGPSLKRAEQAAAKAAIARLEQDGTG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagcatcgtattcactacccgtttcgggaagtcaagttgctggaccaggcgctg
acgcacagctcctgggccaatgaacacggcggcaagtggccgcacaacgaacgactggaa
tttctgggcgatgccgtgctggaattgtgcgtaacccaggaattgttcgagcgcttcccg
catgtgcgcgaaggcgagctcacgcgcatgcggtcccggctggtaagccagccagccttg
agcggcctggcccgggagattggcctggaaacctgcctgcgcctgggcaagggggaagag
agccagggcgggcgggaccgcgcctccctgctggcggacgccatggaagccgtcatcggc
gcggtgtttctggatggcgggttcgaggcagtgcggacttttttacgggcgttgttcgcc
gagcggtggccggcggatgtggagcggaaaaaggagaaggactacaaatcgcacctccag
gagctcacccagcggctgtaccgggagcggcccggctatgcgctgctggaagccgccggg
ccagagcatgccaaggtgtttgccgtgctgctcacgttgcccacgggcgaaaccgtcacg
gcccagggccccagcctcaaacgcgcggaacaggccgcagccaaggcagccattgcccgg
ttggaacaggacggaactggctga
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