Megalodesulfovibrio gigas: DGI_0203
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Entry
DGI_0203 CDS
T02851
Name
(GenBank) putative DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dgg
Megalodesulfovibrio gigas
Pathway
dgg03030
DNA replication
dgg03430
Mismatch repair
dgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DGI_0203
03430 Mismatch repair
DGI_0203
03440 Homologous recombination
DGI_0203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgg03032
]
DGI_0203
03400 DNA repair and recombination proteins [BR:
dgg03400
]
DGI_0203
Enzymes [BR:
dgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DGI_0203
DNA replication proteins [BR:
dgg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DGI_0203
DNA repair and recombination proteins [BR:
dgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DGI_0203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_14
AAA_30
AAA_16
Herpes_Helicase
AAA_18
AAA_2
AAA_19
TIP49
Motif
Other DBs
NCBI-ProteinID:
AGW12138
UniProt:
T2G793
LinkDB
All DBs
Position
complement(221298..223004)
Genome browser
AA seq
568 aa
AA seq
DB search
MSDASSPILPPSAPESAPASAPPAGGPLTARYRPQRFADVVGQEMVTSILSRASLENRIA
PAYLFSGTRGVGKTTCARIFAKAMNCLTGPTAEPCNQCTHCRQITQGSSVDVVEMDGASN
RGIDDARRLREDVAYAPMACRYKVCIIDEAHMLTREAFNALLKTLEEPPGNVAFILATTE
AHKFPATIISRCQHFIFKRVTHARLAQHLQSVLAREGVDYEDGAVQLLARRAAGSVRDGM
SLLSQVLALGHQGRGRVEEALVRDLLGLAGQDVLQDMLAAIHRQDPVALAGLLRAVLDQG
LDMGFFLRELGQSWRNLFLLKQSGEAALPLLEMSTEAARGWLEWSRKFSLAHIHAAWQMT
LEGQRRVLTSAEPALALELLLLNLAFLPRLLPVASLRREDVPAAPPFSAPPAAPSPAPSS
AAPPAAAPSTPVSPPPSSIPPWEGAAPAPQPAAPSRSWSGFMECYKAALAGTGMASRLHG
VSPVLEGNRLMIPCASEFFHAQLTDPPHFALFSRCLADYFGPGLELVVEPPAPVETQQEM
EAKVLQHPVVQAVQAELAGRIINVKRQQ
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgcgtcgtcccccatcctgcccccgtccgcgccagagagcgccccggcttcg
gcccctccggccggcggtcccctcacggcccgctatcgtccgcaacgctttgccgacgtg
gtggggcaggagatggtcacgtccatcctctcccgggccagcctggaaaatcgcatcgcc
ccggcctatctcttcagcggcacccgcggcgtgggcaagaccacctgcgcccgcatcttc
gccaaggccatgaattgcctgaccggtcccacggccgaaccgtgcaaccagtgcacgcat
tgccggcagatcacccagggatccagcgtggatgtggtggagatggacggcgcctccaac
cgcggcatcgacgatgcccgccgcctgcgcgaggacgtggcctacgcgcccatggcctgc
cggtacaaggtctgcatcattgacgaagcccatatgctcacccgcgaggccttcaacgcc
ctgctgaagacgctggaggagccgccgggcaacgtcgcgttcatcctggccaccaccgag
gcccacaagtttccggcgaccatcatcagccgttgccagcacttcattttcaagcgcgtc
acccatgcccgtctggcgcagcacctgcaaagcgtgctggcccgcgagggcgtggactac
gaagacggcgccgtgcagctgctggcccgccgggccgcaggcagcgtgcgggacggcatg
tccctgctcagtcaggtgctggccctggggcaccagggccggggcagggtggaagaagcc
ctggtgcgcgatctgctgggcctggccggacaggacgtgctgcaggacatgctggccgcc
atccatcgccaggatcccgtggccctggccgggctgctccgggccgtgctggatcagggg
ctggacatgggattttttctgcgggaactgggccagagctggcgcaatctgtttctgctc
aagcagagcggggaggctgccctgcccctgctggagatgagcaccgaggcggcccggggc
tggctggagtggtcccgcaagttctccctggcccacatccatgccgcgtggcagatgacc
ctggaagggcagcgccgggtgcttaccagcgcggaaccggccctggccctggaactgctg
ctgctgaatctggcgtttttgccgcgactgctgcccgtggcttccttgcggcgggaggac
gtgccggcagccccgccgttttctgcaccgccggctgcaccgtctcccgcgccgtcttct
gccgcaccgccggctgccgcgccgtccacgcctgtttcgccgccgccgtcttccatccca
ccctgggagggggcagcgccagccccgcagcccgcagcgccgtcccgctcttggtcggga
ttcatggagtgctacaaggcggccctggccgggacgggcatggcctcgcggctgcacggg
gtttcgccggtgttggaggggaatcggctgatgattccctgcgccagcgagttttttcat
gcgcaactgacggacccgccgcacttcgcgctgttctcccgttgtctggccgactatttc
gggccgggcctggagctggtggtggagccgcccgcgccggtggagacgcagcaggagatg
gaagccaaagtgctgcagcatccggtggtgcaggccgtgcaggccgagctggccggccgc
atcatcaatgtgaagcggcagcagtag
DBGET
integrated database retrieval system
