Megalodesulfovibrio gigas: DGI_0295
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Entry
DGI_0295 CDS
T02851
Name
(GenBank) putative primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dgg
Megalodesulfovibrio gigas
Pathway
dgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DGI_0295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dgg03400
]
DGI_0295
Enzymes [BR:
dgg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DGI_0295
DNA repair and recombination proteins [BR:
dgg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DGI_0295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
Zn_ribbon_PriA
Helicase_C
ResIII
AAA_30
PriA_3primeBD
AAA_16
AAA_25
PIF1
SRP54
nSTAND_NTPase5
IstB_IS21
AAA
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AGW12225
UniProt:
T2G6M2
LinkDB
All DBs
Position
complement(325642..328050)
Genome browser
AA seq
802 aa
AA seq
DB search
MASPPEPLQVNAQRAALLSPPFLAYHYRIPDTPPAAGFLPGMRVAVPLGNTVRAAVLLPQ
DAGWDTAAGTALTPPEGIALKPVAWPLERVPLFSAAHLDVLRQLALRQGMLLGQVLASVL
PAGLKVADIRYRLQGIPKLRSLRIRDVAAADAALRQTLSRAWEAGAMQPEAAFRETQFCW
LSQDPPWPVRPAAVNQLKILEYLWEHGPVPVPVLLAALGDGVRESLRRLVDVGLVRQGLV
PPGQQEEEMDPACVLAGAPPPPTLNEEQAAALASLSEALHRWQGETRLLYGVTGSGKTTV
YLALARECLRAGRSVVLLAPEIALACNLRSAAAQAFPEAELIFHHGSQTPARREAQFRKL
AGRGEGDAPVIVVGARSALFLPLHDLGLIVLDEEHDASFKQEERLPYQAKELGYVMARRF
GALLLLGSATPDIKSFHAAQTGALPMAGLTRRHGGAQLPAIEFVDIKGLSSFDQLLAPQT
MAMVEETVRRGEQAIILLNRRGYAPAMYCQDCGHVLRCPQCQIGLTYHKGRERMLCHYCG
EGVPWPCLCPQCGGISFLPLGEGTQRMEEVLTRHLGRDTTVLRLDRDAARRPGRLEEILS
AFARKEAQVLVGTQMLSKGHDFPDVTQVVVADADMGLNLPDFRAAERTFQLLMQVSGRAG
RGDKPGRVAIQTRDASHYCFEHLKTHDYQGFFEEELARRKKWRYPPFVKLGLVRVSFPAE
WEGHAAALAALAGRSREAGREHGVQVMGPAPAPLPMLQGRKRFHLLFKGEDWSRLRAVFA
ALKPLQDDTLRLTLDLDPLDMM
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagtcctccggagcctctccaggtgaatgcccagcgcgcggctctgctttcgccg
ccatttctcgcctatcactatcgtattccagacacgccccccgctgccgggtttctcccc
ggcatgcgggtggcggtgccgttgggcaacaccgtccgtgccgccgtgctcctgccccag
gacgccggctgggacaccgcggccggcactgcattgacgccgcccgaaggcatcgccctc
aagccggtggcctggcccctggaacgcgtccccctgttttctgcggcgcatctggatgtg
ctgcgccaactggccctgcgccagggcatgctgctggggcaggtgctggccagtgtgctg
ccggccgggctcaaggtggcggacatccgctatcgtctgcaaggcatcccgaaactgcgc
agcctccgcatccgggacgtggccgcggccgatgccgccctgcgccagaccctgtccagg
gcctgggaggccggggccatgcagcccgaggccgccttccgcgaaacgcagttctgctgg
ctctcccaggatccgccctggccggtgcggccggcggcagtcaatcagctcaaaattctt
gaatacctctgggagcacggcccggttcctgtgccggtgctgctggccgccctgggcgac
ggcgtgcgcgagagcctgcgccggctggtggatgtggggctggtgcgacaggggctggtg
ccgcccggccagcaggaggaggagatggatcccgcctgcgtgctggccggtgcgccgccg
ccgccgaccctgaacgaggagcaggccgcggccctggcttccctttcggaagccctgcac
cgttggcagggcgagacgcggctgctgtatggcgtcaccggcagcggcaagaccacggtg
tatctggccctggcccgggagtgcctgcgggccgggcggtccgtggtgctgctggcgccg
gaaatcgccctggcctgcaacctgcgcagcgccgcggcccaggcctttcccgaggcggaa
ctcatcttccaccacgggtcccagaccccggcccgccgcgaggcgcagttccgcaagctg
gccggcagaggggagggcgacgcgccggtgatcgtggtgggcgcgcgctcggccctgttt
ctgcccctgcacgacctggggctgattgtcctggatgaagagcacgacgcctccttcaag
caggaggagcgcctgccgtatcaggccaaggaactgggctatgtcatggcccggcgcttt
ggcgcgctgctgttgctgggctcggccacgccggacatcaagtccttccacgccgcgcaa
accggggcgttgcccatggccggcctcacccggcggcatggcggggcgcagctgccggcc
atcgaatttgtggacatcaagggcctgtcgtccttcgatcagctcctggccccccagacc
atggccatggtggaggagactgtccgccgcggcgagcaggccatcatcctgcttaaccgg
cgcgggtacgccccggccatgtactgccaggactgcggccacgtgctgcgctgcccgcag
tgtcagatcggcctcacctaccacaagggccgcgagcgcatgctgtgccactattgcggc
gagggcgtgccctggccctgcctgtgtccgcagtgcggcggcatctcgtttctgcccctg
ggcgaaggcacccagcgcatggaggaggttctgacccggcacctggggcgcgataccacg
gtgctgcgtctggatcgcgacgccgcccgccgccccggccggctggaagagatcctgtcc
gcctttgcccgcaaggaagcccaggtgctggtggggacgcagatgctttccaaggggcac
gacttccccgacgtgacccaggtggtggtggccgatgcggacatgggcctgaacctgccg
gattttcgcgccgcggaacgcacgtttcagctgctgatgcaggtctcgggccgggccggc
cggggcgacaagcccggccgtgtggccatccagacgcgggatgcctcgcactactgtttc
gagcatctcaagacgcacgactaccaggggttcttcgaggaggaactcgcccggcgcaag
aagtggcgctatccgccctttgtcaagctggggctggtgcgggtcagctttcccgcggaa
tgggagggccacgccgccgccctggccgccctggccggccgttcccgcgaggccggccgc
gagcacggcgtccaggtcatgggccctgcgcctgcgcccctgcccatgcttcagggccgc
aaacgttttcatctgctgttcaagggcgaggactggagccgcctgcgcgccgtgttcgcc
gccctcaaacccctgcaggacgacaccctgcgcctgaccctggatctcgaccccctggac
atgatgtga
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