Megalodesulfovibrio gigas: DGI_1080
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Entry
DGI_1080 CDS
T02851
Name
(GenBank) putative RNA polymerase sigma 28 subunit
KO
K02405
RNA polymerase sigma factor FliA
Organism
dgg
Megalodesulfovibrio gigas
Pathway
dgg02020
Two-component system
dgg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DGI_1080
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DGI_1080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgg03021
]
DGI_1080
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dgg02035
]
DGI_1080
Transcription machinery [BR:
dgg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DGI_1080
Bacterial motility proteins [BR:
dgg02035
]
Flagellar system
Flagellar assembly proteins
Stator
DGI_1080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
PhyR_sigma-like
GerE
HTH_15
HTH_9
Motif
Other DBs
NCBI-ProteinID:
AGW12954
UniProt:
T2G9U6
LinkDB
All DBs
Position
complement(1151167..1151907)
Genome browser
AA seq
246 aa
AA seq
DB search
MLETGKLAWHDMDAPAKQRVVRHYASKIKYLALRLKAKLPRHVELGDIISSGTLGLMEAL
GKFNPELGIKFDTYAENRIKGAMLDELRRMDWFSRGLRHRVKLLEDHAKRFEYTHGRRPT
EEELAQDTGLSEKDVRHGLEALQNQFCLDLDAIQDTFSSENRAHTENEPYHSTALQEVID
KVAGLIEELTPRERMVMSLYYGDELTMREVAEVMEVTEGRVSQLHSQAMTRLRSLFRKRY
GQDFTM
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgaaaccggcaagctcgcctggcacgacatggacgcccctgccaagcagcgggtg
gtgcgccattacgcatccaagatcaaatatctggccctgcggctcaaggccaagctgccc
cgccatgtggagttgggagacatcatcagctctggcaccctggggctcatggaggccttg
ggcaagttcaaccctgagctgggcatcaagttcgatacctacgccgaaaaccgcatcaaa
ggcgccatgctggatgagctgcggcgcatggactggttctccaggggcctgcggcaccgg
gtgaagctcctggaagaccacgcgaaacgcttcgaatacacccatggccgcaggcccacg
gaagaagagcttgcccaggatacgggcctttcggaaaaggatgtccgccacggcctggag
gccctgcagaaccagttctgcctggacctcgacgccatccaggacaccttctcgtccgaa
aacagggcacacacggagaacgagccgtatcattccacagcgttgcaggaagtgatcgac
aaggtggccggcctcattgaggaactgacgccccgcgaacggatggtcatgtccttgtat
tatggtgatgagctgaccatgcgtgaggtggcggaagtcatggaggtgaccgagggccgt
gtgtcccagttgcacagccaggccatgacccggttgcggtcgctgttccgcaaacgctac
ggccaggatttcacgatgtaa
DBGET
integrated database retrieval system
