Megalodesulfovibrio gigas: DGI_1135
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Entry
DGI_1135 CDS
T02851
Name
(GenBank) putative DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dgg
Megalodesulfovibrio gigas
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgg03032
]
DGI_1135
03400 DNA repair and recombination proteins [BR:
dgg03400
]
DGI_1135
Enzymes [BR:
dgg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DGI_1135
DNA replication proteins [BR:
dgg03032
]
Prokaryotic type
DNA Topoisomerases
DGI_1135
DNA repair and recombination proteins [BR:
dgg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DGI_1135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Glyco_hydro_109_C
Motif
Other DBs
NCBI-ProteinID:
AGW13001
UniProt:
T2GA48
LinkDB
All DBs
Position
complement(1205560..1208010)
Genome browser
AA seq
816 aa
AA seq
DB search
MSEFGIQPISIEQEIKKSYLEYSLSVIIGRAIPDVRDGLKPVHRRILFGMHELSNTWNRP
HLKSARVVGDVMGKYHPHGDAAIYDALVRMAQPFSMRDVLVDGQGNFGSIDGDSPAAQRY
TEVRMAKLASEMLADLDKETVDFRPNYDDSEKEPVVLPAKVPNLLLNGSSGIAVGMATNI
PPHNLGELCDGVLHLLDDPDCSIVDLMQHIKGPDFPTAGQVFAGQGLYDAYCTGRGSVRV
RGVIRQEERKKGFESLVITELPFAVNKTSLVEKIASLVNDKKIEGVSDLRDESNRKGIRV
VLDLKKGAMPEIIINALFKYTPLESSFGVNMLAVVDNRPKLLNLKDVLRHFLSHRREVVI
RRTRYELRKAEDRAHILEGLRIAIDNIDEIIELIRTSANPPDAKARLIERFVLSEVQAQA
ILSMQLQRLTGLEVEKIIEEYEELLKRIQYLKSILESPEVLKGVIRAEVEEVRQLYVTPR
KSEILPDDLSEFVIEDLIPDDEVILTLSRRGYIKRTTLDNYRVQGRGGKGVAAVQTSDGD
FIHTFCATSNHQTLLLFSNKGRMYSVKVHQVPEGSRTAKGMHIANLLPLEREEWIATALT
MREFVETRALLFVTRKGVVKRSEATLYSNVRRAGIIALNLREDDELIMVREVGDTDECVL
TTQKGLAIRFPVNEVRLMGRASAGVKGMTLASNDDVVAGVILKAGNGVQEILSISSNGYG
KRTLIEHYRLQSRGGKGVINMKVTSKTGDVIGAMPVSESDELILLTTANKAIRTSVREIS
LVGRATQGVRIVRMDEKDSVAAFDLVRETLTDACQV
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaattcggcattcagcccatcagtattgagcaggagatcaagaagtcgtatctt
gaatactccttgagcgtcatcattggccgcgccattccggacgtgcgcgacggcctcaag
cctgtgcatcgccgcatcctcttcggcatgcacgagctctccaacacctggaaccggccc
catctcaagtctgcccgcgtggtgggcgatgtcatgggtaagtaccatccccatggcgac
gccgccatctacgacgccctggtgcgcatggcccagcccttctccatgcgcgatgtgctc
gtggacggccaggggaacttcggctccattgacggcgattcccccgccgcccagcgttac
accgaagtgcgcatggccaagctggccagtgaaatgctggccgacctggacaaggagacc
gtggacttccggcccaactacgacgactccgaaaaagagcccgtggtgctgccggccaag
gtgccgaacctgctgctcaacggctcctccggcattgccgtgggcatggccaccaacatc
ccgccccacaacctgggcgaactgtgcgacggcgtgcttcacctgctggacgacccggac
tgctccatcgtggacctgatgcagcacatcaaaggcccggactttcccaccgccggccag
gtgttcgccggccagggcctctatgatgcctactgcaccggccgcggctcggtgcgcgtg
cgcggggtcattcgccaggaggagcgcaagaagggcttcgaatccctggtgattaccgaa
ctgccctttgccgtgaacaagacctccctggtggagaagatcgcctccctggtcaacgac
aagaagatcgagggcgtgagcgacctgcgcgacgagtccaaccgcaagggcatccgcgtg
gtgctggatctcaaaaagggcgccatgcccgagatcatcatcaatgccctgttcaagtac
acccccctggaatccagcttcggggtgaacatgctggccgtggtggacaaccggcccaag
ctcctgaacctcaaggacgtgctgcggcacttcctctctcaccggcgtgaggtggtcatc
cgccgcacccgctatgagctgcgcaaggccgaggaccgcgcccacatcctcgaaggcctg
cgcatcgccatcgacaacatcgatgagatcatcgaactcatcaggacaagcgccaatccg
cccgatgccaaggcccggcttatcgaacgcttcgtgctttccgaagtccaggcccaggcc
atcctttccatgcagctgcagcgcctcaccgggctggaagtggaaaagatcatcgaggaa
tacgaagaactgctcaagcgcatccagtacctcaagagcattctggaaagccccgaggtg
ctcaagggcgtcatccgggccgaggtggaggaagtccggcagctgtacgtcacgccgcgc
aagagcgagatcctgcccgacgacctgagcgaattcgtcattgaggatttgattcccgac
gacgaagtcatcctcactctctcccggcggggctacatcaagcgcaccaccctggacaac
taccgggtgcagggtcgtggcggcaagggcgtggctgccgtgcaaaccagcgacggcgac
ttcatccacaccttctgtgccacatccaaccaccagacactgctgctcttttccaacaag
ggccgcatgtattccgtcaaggtgcatcaggtgcccgagggcagccgcacggccaagggc
atgcacatcgccaacctgctgcccctggagcgcgaggagtggattgccacggcgctgacc
atgcgcgagttcgtggaaacccgcgccctgctcttcgtcacccgcaagggcgtggtcaag
cgctcggaagccaccttgtattccaacgtgcgccgcgccggcatcatcgccctgaacctg
cgcgaggacgacgagctgatcatggtccgcgaagtgggcgacaccgacgaatgcgtcctc
accacgcaaaagggcctggccatccgcttcccggttaacgaagtccgcctcatgggccgg
gccagcgcgggcgtcaaaggcatgaccctggccagcaacgacgacgtggtggccggcgtc
atcctcaaggccggcaacggcgtgcaggagattctctccatctccagcaacggctacggc
aagcgcaccctcatcgagcattaccggctgcagtcccgcggtggcaagggcgtgatcaac
atgaaagtcacctccaagaccggggatgtcatcggcgccatgcccgtgagcgaaagcgat
gaactcatcctgctgaccacggccaacaaggctatccggacctcggtgcgggaaatcagc
ctggtgggccgtgccacccagggcgtgcgcatcgtgcgcatggacgagaaagacagcgtg
gccgccttcgatctggtccgggaaacccttaccgacgcctgtcaggtgtag
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