Megalodesulfovibrio gigas: DGI_1509
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Entry
DGI_1509 CDS
T02851
Name
(GenBank) putative metal dependent phosphohydrolase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dgg
Megalodesulfovibrio gigas
Pathway
dgg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DGI_1509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgg03019
]
DGI_1509
Enzymes [BR:
dgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
DGI_1509
Messenger RNA biogenesis [BR:
dgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DGI_1509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CNV-Replicase_N
HD
tRNA_NucTran2_2
PolyA_pol_RNAbd
HlyD_D4
Med14_C
Motif
Other DBs
NCBI-ProteinID:
AGW13350
UniProt:
T2G9S9
LinkDB
All DBs
Position
1628650..1629996
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AA seq
448 aa
AA seq
DB search
MSGSLHESIPFRDALSLCKAICRNGFDAYVVNPQLQEEVIRLTGRQEVDIVADACLDDLL
KILPEAQAPDENHLTAIVDQGGVRFRFYPEEMAECAHPEAAVARITPRIVKALESVGAPA
LDLACPWLPRVADPNEGFADMTDGVIRLAGMPDETLRRNYLLAVRAIRFAANFNLPIEPN
TWLAIVRSARRVLDYVSITDIMDEWRKVEAENLSLFASLMYDAQILHGLMPEVAALTRVK
QTSEDGGEEVTVLQHTFDAMRCYPEELPYDWFGCMALLFHGVGKLYTAQVAGGEWHFSQY
ADVGAKITRKILTRLRFSPEDTDLICHLVRHHHRFSYMLSDKGIRRFKALDEYPRLIEMA
RARLKAMRGSYKSFNHNLKLLERADVPEEMLEPLLNGNEIMDFTGLKPGPQVGVLRDQLL
QAQIRGDVQSVPEAVEFVKQYVAREKLG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttcgctgcacgaaagcattcccttccgcgacgccttgtccctgtgcaaggcc
atctgccgcaacgggtttgatgcctatgtggtcaacccgcaactgcaggaagaggtgatc
cgcctcaccggccgccaggaagtggatattgtggccgatgcctgtctggacgatctcctc
aagattttgcctgaagcccaggcgccggacgaaaatcacctcacggccatcgtggaccag
ggcggcgtgcggtttcggttttatcccgaagagatggccgaatgcgcccacccggaagcc
gcagtggcccggattacgccgcgcatcgtcaaggcgttggaaagcgttggcgcgccggcc
ctggatctggcctgcccctggctgccccgggtggcggaccccaacgagggctttgccgac
atgaccgacggcgtcatccggctggccggcatgcccgacgaaaccctgcgccgcaactac
ctgcttgccgtgcgggccatccgttttgccgccaacttcaatctgcccatcgagcccaac
acctggctggccattgtccgcagcgcccgccgtgtgctggattacgtctccatcacggac
atcatggatgaatggcgcaaggtggaggccgagaatctctccctgtttgcctccctgatg
tacgacgcccagattctccacggcctgatgcccgaagtggcggcgctgacccgcgtgaag
cagaccagcgaggacggcggcgaggaagtgaccgtgctgcagcacaccttcgacgccatg
cgctgctaccccgaagagctgccctacgactggttcggctgcatggccctgctgttccac
ggcgtgggcaagctgtacaccgcccaggtggccggcggggagtggcacttctcccagtat
gcggacgtgggcgcgaagattacccgcaaaattctcacccgcctgcgtttttcccccgag
gatacggatctcatctgccacctggtccggcaccatcaccggttttcgtacatgttgtcg
gacaagggtatccgccgcttcaaggccctggacgagtacccccggctcatcgagatggcc
cgcgcccgtctcaaggccatgcgcggcagctacaagagctttaaccacaacctgaagctc
ctggaacgcgccgatgtgcccgaagagatgctggaaccgctgctcaacggcaacgaaatc
atggatttcaccggcctgaagcccgggccgcaggtgggcgtgctgcgcgatcagctgctg
caggcccagatccgcggggacgtgcaatccgtgcccgaggctgtggagttcgtgaaacaa
tacgtggccagggaaaagctggggtag
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