Megalodesulfovibrio gigas: DGI_1555
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Entry
DGI_1555 CDS
T02851
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dgg
Megalodesulfovibrio gigas
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dgg03016
]
DGI_1555
Enzymes [BR:
dgg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DGI_1555
Transfer RNA biogenesis [BR:
dgg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DGI_1555
Prokaryotic type
DGI_1555
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AGW13394
UniProt:
T2GB40
LinkDB
All DBs
Position
complement(1676934..1677884)
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AA seq
316 aa
AA seq
DB search
MARRSRHRGSDRQLHGVLVLHKPEGPTSAACLERVKRVCGQPRIGHAGTLDPLATGVLVV
LLGQATKLSNYLTGADKTYVGELELGRTTDTYDIQGTETSRADWSSLTPETVAAAVTAWQ
DDTTQEVPAYSAAKHQGEPLYKLAREGRDAPVKVKEITIYEAEAVTLDLPRCIFRVRCSA
GAYVRSLVHSLGIRLGCGAVMTALTRTQSHPFTLDMAVSLDDILAEPERLGERIIPLEHA
LPHWPRVALDARQAEELKRSGRLPWEAGTTDAQAFAPGQRALFLDQHGKALGLMETGIEK
TGGAAVWTVLRGLWEA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggctaggcgctcccgtcatcgcggcagcgaccgccagctccatggcgtgctggtgctg
cacaagccggaaggccccacctccgcggcgtgcctggaacgcgtgaagcgcgtgtgcggc
cagccgcgcatcggccatgccggcaccctggaccccctggccacaggggtgctggtggtg
ctgctgggccaggccaccaaactttccaattacctgaccggcgcggacaaaacgtacgtg
ggcgaactggaactcggccgcaccacggacacctatgacatccagggcacggaaaccagc
cgggcggactggtcgtccctcacgccggagacggtcgccgccgccgtgaccgcctggcag
gacgacaccacccaggaagtgccggcctactctgccgccaagcaccagggcgagcccctg
tacaagctggcgcgcgagggccgtgacgccccggtcaaggtcaaggaaatcactatttac
gaggcagaagcagtcacgctggatctgcctcgatgcatctttcgggtccgctgcagcgcc
ggcgcttatgtccggtccctggtccacagcctggggattcggctgggctgcggcgctgtg
atgacggcgctgacccgaacccaaagccaccccttcaccctggacatggccgtctccctg
gacgacatcctggccgaacccgaacgtcttggggaacgcatcattcccctggaacacgcg
ctgccccactggccgcgcgtggccctggacgcccggcaggccgaggaactcaagcgcagc
ggcaggctgccctgggaggccggaaccacggacgcgcaggcttttgcacccggccagcgc
gccctgtttctggaccagcacggcaaggccctcgggctcatggaaaccgggatcgagaag
acgggcggcgccgcggtatggactgtgctcagaggcctctgggaggcttga
DBGET
integrated database retrieval system
