Megalodesulfovibrio gigas: DGI_1680
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Entry
DGI_1680 CDS
T02851
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
dgg
Megalodesulfovibrio gigas
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dgg03009
]
DGI_1680
Ribosome biogenesis [BR:
dgg03009
]
Prokaryotic type
ribosomal protein modification factors
DGI_1680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
TPR_2
TPR_8
TPR_1
TPR_16
TPR_9
TPR_12
TPR_11
HEAT_Nup120
PknG_TPR
Motif
Other DBs
NCBI-ProteinID:
AGW13499
UniProt:
T2GBE8
LinkDB
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Position
1801475..1803256
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AA seq
593 aa
AA seq
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MTAASIRHITIGASPKGVSRDLDKAIPPAETVARVLGVLEDRAILQELRRIDVGRLGIPV
YLSVCGEAARGVMPTRKQMGKGSSPEQAQASALMELVERYSFFSFWDNADALLVGRYSQA
LAGELPGQTPAHGSVLPVARVLQSVGEAMDEATALQLLDLIELQFATATDLATGQDVLAP
LSWFRRLGEFNGTSAGNTPEESILQGLCELVERHVCCLVDRQRPTDLPTIDPASCTDPVL
ADLLARFAENGIVVLLKDFSMGLPVPTVGAAAWDPETFPQLSEVVFTAGTATSPAKAAVR
ALTEVAQLAGDFITGACYEASGLHKPTAWNELDWLQQGPRVPLASLPDIRDQDMGQELRA
LVQGLTAQGWQCLSVDLTLPELGLPAHYNIVPGMAFRERDRHASLGMFIGRQLAEDAPAD
DAREGLALLEQAYPGAHFVSFFQGLFHLREGEYLAAAACFEEAEPLQPDDEARALAAFYQ
GYVWSLLEDWAGSEPCLNRALALTDEVKEYFNLRGVARFKQGQFEAAAGDFEAALRLDKG
SAIDLANLGLCKKNMGLTEEACELLRAAVALDAGLDFAAQTLLQLEDGKDSVE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcttccatccgacacatcaccattggcgcgtctcccaagggcgtctcccgc
gatctggacaaggccataccgccggccgaaaccgtggcgcgggtgctcggcgtgctggaa
gatcgggccatcctgcaggagctcaggcgcatcgacgtgggccggctgggcatccccgtg
tacctgagcgtctgcggcgaggctgcccggggcgtcatgcccaccagaaagcagatgggc
aagggatcctcgccggagcaggcccaggcctcggccctcatggagctggtggagcgttac
agcttcttcagcttctgggacaatgccgacgccctgcttgtcgggcgctacagccaggcc
ctggccggcgagctgcccggacagacgccggcgcatggcagcgtgctccccgtggcgcgg
gtgctgcaaagcgtgggcgaggccatggacgaagccacggccctgcagctgctggatctc
atcgaactacagttcgccacggccacggatctggccacagggcaggacgtgctggcaccc
ctgtcctggttccggcggctgggcgagttcaacggcacctccgccggcaacacgcccgag
gaatccatcctccagggcctgtgcgagctggtggagcggcacgtctgctgcctggtggat
cgccagcggcccacggatctgcccaccatcgacccggcctcctgcacggaccccgtattg
gcggacttgctggccaggttcgcggagaatggcattgtggtgctgctgaaggatttttcc
atgggcctgcccgtgcccacggtgggggcggcggcctgggatcctgagacgtttccgcag
ctttcggaagtggtcttcaccgccggcacggccacctctccggccaaggcggcggtgcgc
gccctgacggaagtggcgcagctggccggggatttcatcaccggcgcatgctacgaggcc
tccggcctgcacaagcccactgcctggaacgagctggactggctgcagcagggccccagg
gtgcccctggccagcctgccggacatccgggatcaggacatgggccaggaactgcgcgcc
ctggtgcagggcctgacggcccagggctggcagtgtctgagtgtggatctgaccctgccc
gagctgggcttgccggcgcattacaacatcgtgccggggatggcctttcgggagcgtgac
cgccatgccagcctgggaatgttcatcggccgccaacttgcagaggatgccccggccgac
gacgcccgcgaggggctggccctgctggagcaggcctatcccggcgcgcactttgtctcg
ttcttccaggggttgttccacctgcgggaaggggagtatctggccgcggcggcctgcttt
gaggaggccgagcccctgcagccggacgatgaggcccgcgccctggcagcgttctatcag
ggctatgtctggtctctgctggaggactgggccggctccgagccctgcctcaaccgcgcc
ctggccctgactgacgaggtgaaggagtacttcaacctgcgcggtgtggcgcgattcaag
cagggacagttcgaggctgcagccggcgatttcgaggccgccctgcggctggacaagggc
tcggccatcgacttggccaaccttggattatgtaagaaaaatatggggttgacggaggag
gcctgcgagctgctgcgcgccgccgtagccttggatgccggactggatttcgccgcccaa
accctgctgcagttggaggacggaaaggattctgtggaataa
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