Megalodesulfovibrio gigas: DGI_1720
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Entry
DGI_1720 CDS
T02851
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dgg
Megalodesulfovibrio gigas
Pathway
dgg00300
Lysine biosynthesis
dgg00470
D-Amino acid metabolism
dgg01100
Metabolic pathways
dgg01110
Biosynthesis of secondary metabolites
dgg01120
Microbial metabolism in diverse environments
dgg01230
Biosynthesis of amino acids
Module
dgg_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DGI_1720
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DGI_1720
Enzymes [BR:
dgg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DGI_1720
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AGW13537
UniProt:
T2GCA2
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All DBs
Position
complement(1844284..1845537)
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AA seq
417 aa
AA seq
DB search
MHHFEYRDGQLFAEDVPVARLAEEFGTPLYVYSAATFSRHFEIFDAAFNELPHLTCYSVK
ANSNLSVLNLLAKKGAGMDIVSGGELYRALAAGVPADKIVYSGVGKRPEEIKEALEAGIL
MFNVESQAELVRINEIAQAMGTRARISLRINPDVDPQTHPYISTGMKKNKFGLDMETSMQ
AYALAKSLPALDPVGLDCHIGSQLTSIEPFKEAMDKLMAFHDRLTGELGLDIKYLDLGGG
LGIQYNEEDPPHPEVFAQALIPVLKERPLTVILEPGRVIAGNSGLLITKVVYTKDTPSKH
FVIVDAAMNDLTRPALYGSYHRIAEVEPRHRTASIVDVVGPICESSDFLARERTMSAVQS
GELLAVFSAGAYGFSMSSQYNSRCRAAEVLVDGATVTLARARETYEDLVALERGGLK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatttcgagtatcgcgacggccagttgtttgccgaggacgtgcccgtggcccgg
ctggcggaagagttcggcaccccgctgtacgtgtacagtgcggccaccttttcccgccat
ttcgagatttttgacgcagccttcaacgagctgccgcacctgacgtgctactcggtgaaa
gcgaactcgaacctgtccgtgctcaatctgctggccaaaaaaggcgccggcatggacatc
gtctccggcggggagctgtaccgcgccctggctgccggcgtgccggcggataagatcgtc
tattccggcgtgggcaagcggccggaggagatcaaggaggccctggaagcgggcatcctt
atgttcaacgtggaatcccaggcagagctggtccgcatcaacgagatcgcccaggccatg
ggcacccgcgcccgcatcagcctgcgcataaacccggatgtggacccccagacgcacccc
tacatctccacgggcatgaaaaagaacaagttcggcctggacatggagacctccatgcag
gcctatgccctggccaagagcctgcccgccctggatcccgtgggcctggactgccacatc
gggtcccagctcacatccattgagccgttcaaggaagccatggacaagctcatggccttc
cacgaccgcctcaccggcgaactgggcctggacatcaagtacctggaccttggcggcggc
ctgggcatccagtacaacgaagaagacccgcctcatccggaggtgtttgcgcaggccctg
ataccagtgctcaaggaacgccccctcacggtgattctggagccgggccgcgtcatcgcc
ggcaacagcggcctcctcatcaccaaggtggtgtacaccaaggacaccccgagcaagcat
ttcgtcattgtggacgcagccatgaacgacctgacccggccggcgctctacgggtcctac
catcgcatcgccgaggtggagccccggcaccgcaccgcgagcattgtggatgtggtgggc
ccgatctgcgaatccagcgacttcctggcccgggagcggaccatgtctgccgtgcagtcc
ggtgaactgctggccgtgttttccgccggggcgtacggcttcagcatgagttcgcagtac
aactcgcgctgccgggcggcggaagtgctggtggatggcgccaccgtcaccctggcccgt
gcccgcgagacgtacgaagacctggtggccctggaacgaggcggcctgaaatag
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