Megalodesulfovibrio gigas: DGI_1912
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Entry
DGI_1912 CDS
T02851
Name
(GenBank) putative serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dgg
Megalodesulfovibrio gigas
Pathway
dgg00260
Glycine, serine and threonine metabolism
dgg00630
Glyoxylate and dicarboxylate metabolism
dgg00670
One carbon pool by folate
dgg00680
Methane metabolism
dgg01100
Metabolic pathways
dgg01110
Biosynthesis of secondary metabolites
dgg01120
Microbial metabolism in diverse environments
dgg01200
Carbon metabolism
dgg01230
Biosynthesis of amino acids
dgg01240
Biosynthesis of cofactors
dgg04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DGI_1912
09102 Energy metabolism
00680 Methane metabolism
DGI_1912
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DGI_1912
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DGI_1912
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DGI_1912
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DGI_1912
Enzymes [BR:
dgg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DGI_1912
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AGW13693
UniProt:
T2GBM7
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All DBs
Position
complement(2028663..2029904)
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AA seq
413 aa
AA seq
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MEELFIQDPQVARAVQLEVERQTGKLELIASENFTSPAVRQTMGSVLTHKYAEGYPGKRY
YGGCEYVDVAENLARDRVKQLFGAEYANVQPHAGSQANMAVYFGALQPGDTILGMDLSHG
GHLTHGSPVNFSGKLYKIVFYGVKKETGCIDYDQVLELAKQHKPKLIVAGASAYPRTLDF
ARFRAIADEVGAQLMVDMAHIAGLVAADLHPSPIPHAHFTTSTTHKTLRGPRGGLILSSE
EFGKVLNSQIFPGIQGGPLMHVIAAKAVAFAEALRPEFKCYQQQVLKNAQVLAKALTDAG
YSLCSGGTDNHLMLIDLTQKDVTGKDAEHALDLAGITVNKNTVPFETRSPFVTSGVRIGP
AALTTRGMKEAEMEKVASWIVDVLANTTNETRLEAIRKDVETFAREYPLFTWC
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactctttattcaagatccccaggtcgcccgcgcggtgcagctggaagtcgag
cgccagaccggcaagctggagctcatcgcctccgagaacttcacctccccggccgtgcgg
cagaccatgggcagcgtgctcacccataaatatgccgaaggctaccccggcaagcgctat
tacggcgggtgcgaatacgtggacgtggccgagaacctggcccgcgaccgcgtgaagcag
ctctttggcgccgaatacgccaacgtgcagccccacgccgggtcccaggccaacatggcc
gtgtatttcggggccctgcagcccggggataccatcctcggcatggacctctcccatggc
ggccacctgacccacggcagccccgtgaacttctccggcaagctgtacaagatcgtcttc
tacggcgtgaagaaggaaaccggctgcatcgattacgatcaggtcctggaactggccaag
cagcacaagcccaagctcatcgtggccggggccagcgcctacccgcggactctggacttc
gcgcgcttccgcgccattgccgacgaagtcggcgcgcaactgatggtggacatggcccac
atcgccgggctggtggctgcggacctgcacccctcccccatcccgcatgcccacttcacc
acctccaccacgcacaagaccctgcgcgggccgcgcggcgggttgatcctctcctccgaa
gaattcggcaaggtgctcaattcgcaaatcttccccggcatccagggcgggccgctcatg
cacgtcatcgcggccaaggccgtggcgtttgccgaggccctgcggcccgagttcaagtgc
tatcagcagcaggtcctcaagaatgcccaggtgctggccaaggccctcaccgacgccggc
tactctctgtgctccggcggcacggacaaccacctgatgctcatcgacctgacccagaaa
gacgtcaccggcaaggatgccgaacatgccctggatctggccggcatcaccgtgaacaag
aataccgtgccgtttgagacgcgttcccccttcgtcacctccggcgtgcgcatcggccct
gccgccctgaccacccgcggcatgaaggaagcggaaatggaaaaggtggccagctggatt
gtggacgtcctggccaacaccaccaacgaaacgcggctggaagccattcgcaaggacgtg
gaaaccttcgccagagaatacccgctcttcacctggtgctga
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