Megalodesulfovibrio gigas: DGI_2190
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Entry
DGI_2190 CDS
T02851
Name
(GenBank) putative metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dgg
Megalodesulfovibrio gigas
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgg03019
]
DGI_2190
Messenger RNA biogenesis [BR:
dgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DGI_2190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
tRNA_anti_2
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AGW13948
UniProt:
T2GCB9
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All DBs
Position
2290124..2291272
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AA seq
382 aa
AA seq
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MEMIKEQALVKSAVPASHRKDQFVAELVGGQQVADVFVLAQASRRQARNGPFWSLTLQDA
TGQLEAKLWSPQAQDYHDLRAGQIMHVTGRTQMYQDKVQLSVEALRPVLSPETRPQEPEA
EETPWPQPLYTRVELADLVPISAVPPETLLARLEDLLREHILYPPWRRFVFKVLGDPEIR
GRLLVATGAKSMHHAYVGGLLEHTLGVVQLCAHFCRQYPRLDKDVLLAAAAFHDIGKAWE
LVSLPACDYTTEGRLLGHIQLGLQMLEPYLQKMKVDADLVLHFKHIVISHHGEYEYGSPK
RPKTAEAFALHFADNLDAKMNQVERATSTETEEEPGWPVWSEYQRGLDRFLCRPRPTPGQ
AGEDCRPTASAKEDQCSLLLKG
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgatcaaggaacaagccctcgtcaagtccgcggtcccggcctctcaccgcaag
gatcagttcgtggcggaactggttggcggtcagcaggtggcggacgtgtttgtcctggcc
caggcctcccgccgccaggcccgcaacggtcccttctggagtctgaccctgcaggacgcc
accggccagctggaagccaagctgtggagcccccaggcccaggactatcacgatctgcgc
gccgggcaaatcatgcatgtgaccggccgcacccagatgtatcaggacaaggtccagctt
tcggtggaggccctgcggccggtgctctctccggaaacccggccccaggagcccgaagcc
gaggagactccctggccgcaaccgttgtacacgcgtgtggagttggccgatctcgtcccc
atcagcgccgtgccgccggaaaccctgctggcgcggctggaagatctgctgcgcgagcac
atcctgtacccgccatggcggcgctttgtcttcaaggtgctgggcgatccggagatccgc
ggccgcctgctggtggccaccggggccaaaagcatgcatcatgcctatgtgggcggactg
ttggaacacaccctgggcgtggtgcagctgtgcgcgcacttctgccggcagtatccccgg
ctggacaaggatgtgctcctggctgccgcagccttccacgatatcggcaaggcctgggag
ctcgtctccctgccagcctgcgactacaccaccgaaggcaggctgctgggccacatccag
cttggcctgcagatgctggagccctacctgcaaaaaatgaaggtggatgcggatttggtg
ttgcatttcaagcacatcgtcatcagccaccacggcgaatacgaatacggttctcccaag
cgtcccaagacggcagaggcctttgccctgcattttgcagacaacctcgatgccaagatg
aaccaggtggagcgcgccaccagcaccgagaccgaggaagagccgggctggccggtctgg
tccgaatatcagcgcgggctggatcggtttttgtgccggcctcgtcccactcccggccag
gccggggaggattgccgccccaccgcatctgccaaggaagaccaatgttcattacttttg
aagggatag
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