Megalodesulfovibrio gigas: DGI_2792
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Entry
DGI_2792 CDS
T02851
Name
(GenBank) putative excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dgg
Megalodesulfovibrio gigas
Pathway
dgg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DGI_2792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dgg03400
]
DGI_2792
DNA repair and recombination proteins [BR:
dgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DGI_2792
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DGI_2792
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_22
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AGW14521
UniProt:
T2GEG4
LinkDB
All DBs
Position
complement(2946660..2948762)
Genome browser
AA seq
700 aa
AA seq
DB search
MEQPFVISSVFSPQGDQPEAIAQLVANLQAGVKDQVLLGVTGSGKTFTMAQTVARVNRPA
LVLAPNKTLAAQLYNEFRSLFPDNAVEYFVSYYDYYQPEAYIPQSDTYIEKDSSINDEID
KLRHAATHALLTRRDVLIVASVSCIYGLGSPEYYARMLIPLEEGQRLRMDDLMARLVEVQ
YERNDIDFHRGTFRVRGDVLEIIPAYHHERALRLEFFGDELETLSEVDPLTGEILGRLRK
TVVYPASHYVSDRDNLARAVGDIRVELQERLAEFQRQNKLVEAQRLEQRTMLDLEMIEEM
GYCNGIENYSRHLDARAPGTPPSTLLDYFPEDFILFIDESHIAVSQVAGMFNGDRSRKST
LVDFGFRLPSALDNRPLSFEEFQARIGQTIYVSATPGDYELRQSQGVVAEQIIRPTGLVD
PELLVRPVKGQVDDLLGRCKERIARDERVLVTTLTKRMAEDLTAYFTKMGVAARYLHSDV
DTLERVAILQALRKGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSARSLIQTFG
RAARNVAGLVVLYADRITPSMQVAMDETERRRARQVAHNQAHGIVPQSVRKEAENVLDAI
HAQARQREQDGGKSRRGRGKGQPGQPGQPEAAQAAPAPLAAEEAALYGADPKRAAKEIKI
LERQMREAAKELEFERAAQLRDRIKRLRELLTVAEFSDVP
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcccttcgtcatatccagcgtcttttcgccccagggagaccagcccgaggcc
atcgcccagctggtggccaacctgcaggctggtgtcaaggatcaggtgcttctgggcgtc
accggctcgggcaagaccttcaccatggcccagaccgtggcccgcgtgaaccggccggcc
ctggtgctggcccccaacaagaccctggccgcccagctgtacaacgagttccgctccctg
ttcccagacaatgcggtggagtatttcgtcagttattacgattactaccagccggaagcc
tacatcccgcagtccgatacgtacatcgagaaggactcgtccatcaatgacgagatcgac
aagctccgccacgccgccacccatgccttgctcacccggcgcgatgtgctcatcgtggcg
tcggtctcctgcatttacggcctgggctctccggaatactacgcccgcatgctcattccc
ctggaggaaggccagcgcctgcgcatggatgacctcatggcccgcctggtggaagtgcag
tacgagcgcaacgacatcgactttcatcgcggtaccttccgcgtgcgtggggatgtgctg
gaaatcatccctgcctaccaccacgaacgcgccctgcgcctggaattttttggcgatgag
ctggagaccctgagcgaggtggatcccctgaccggcgagatcctgggccggctgcgcaaa
accgtggtctatcctgccagccattacgtgtcggaccgcgacaacctcgcccgcgccgtg
ggggatattcgcgtggagctgcaggaacggctggccgagttccagcgccagaacaagctg
gtggaagcccagcgcctggagcagcgtaccatgctcgatctggaaatgatcgaggaaatg
ggctactgcaacggcatcgagaactattcccgccacctggacgcccgcgccccgggcacg
ccgccgtccacgctgctggattatttccccgaagacttcattctgttcatcgacgaatcc
cacatcgccgtgtcccaggtggccggcatgttcaacggggaccgctcccgcaagtccacc
ctggtggacttcggcttccgcctgccctcggccctggacaaccggcccttgagttttgag
gagttccaggcgcgcatcgggcagaccatctacgtctcggccacgcccggagactacgag
ctgcgccagagccagggcgtggtggcggagcagatcatccgtcccacaggcttggtggac
ccggaactgcttgtccggccggtcaagggacaggtggatgacctgctgggccgctgcaag
gagcgcattgcccgggacgaacgcgtgctggtgaccaccctgaccaagcgcatggccgag
gatttgacggcatatttcaccaagatgggtgtggccgcccgctacctgcactctgatgtg
gataccctggagcgcgtggccatcctccaggccctgcgcaagggcgaattcgatgtgctg
gtgggcatcaacctgctgcgcgaagggctggatctgccggaagtctccctggtggccatt
ctggatgcggacaaggaaggctttttgcgttccgcacggtccctcatccagacctttggc
cgcgccgcgcgcaatgtggccgggctggtggtgctatatgccgacaggatcaccccctcc
atgcaggtggccatggacgagaccgaacgccgccgcgcccggcaggttgcccacaatcag
gcccatggcattgtgccgcagtccgtgcgcaaggaggcggaaaatgtcctggacgccatc
cacgcccaggcccgtcagcgtgagcaggacggcggcaagtcccgccgcggccgcggcaag
ggccagcccggccagcccggccagccggaagcggcccaggcagccccggcccccctggcg
gcggaagaagccgccctctacggcgcagaccccaaacgcgccgccaaggaaatcaagatc
ctggaacgccagatgcgcgaggccgccaaggagctggaattcgaacgcgccgcccaactg
cgcgaccgcatcaagcggctgcgtgaacttctgaccgtcgccgagttctcggacgttcca
tga
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