Megalodesulfovibrio gigas: DGI_2807
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Entry
DGI_2807 CDS
T02851
Name
(GenBank) putative DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dgg
Megalodesulfovibrio gigas
Pathway
dgg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DGI_2807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgg03021
]
DGI_2807
03400 DNA repair and recombination proteins [BR:
dgg03400
]
DGI_2807
Enzymes [BR:
dgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DGI_2807
Transcription machinery [BR:
dgg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DGI_2807
DNA repair and recombination proteins [BR:
dgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DGI_2807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Spectrin_7
Motif
Other DBs
NCBI-ProteinID:
AGW14536
UniProt:
T2GEH6
LinkDB
All DBs
Position
complement(2962999..2964042)
Genome browser
AA seq
347 aa
AA seq
DB search
MLIRQGERLINTRNWQELVRPEQIVRDGKSDVLYGRFVCEPLERGFGTTIGNALRRVLLS
ALQGAAPVAMRVDGVQHEFTTIPGVMEDVTDIVLNIKQVRFAMSSDDPQRIHLQADQRGV
VTAAAVRETHNVAVLNPEQHIATLTEDVPLHMELELRMGKGYVPAEMHEGLSDEIGLIKL
DASFSPVRRVAYTVEQARVGQMTNYDKLILEVWTDGSVSPEDAIAYSAKILKDQLTVFIN
FDEEVSQEDGIGSSLSSDLNENLFKSIDELELSVRATNCLKSANISLVGELVQRTENDML
KTKNFGRKSLDEIRRVLQDMGLEFGLKVDNFEQRYQEWLKRKEQHEA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcagacagggcgaacggctcatcaacacccggaactggcaggaactcgtcagg
cccgagcagatcgtgcgcgacggcaagtccgacgtgctgtatggcaggttcgtctgcgaa
cccctggagcgcggcttcggcaccaccatcggcaatgcgctgcggcgggtcctcttgtcc
gcgctgcagggcgccgcaccggtggccatgcgcgtcgacggggtgcagcacgaattcacc
accatccccggggtgatggaggacgtgacggatattgtcctcaacatcaagcaagtgcgt
ttcgccatgagctccgacgacccgcagcgcatccacctgcaggcggatcagcgcggtgtg
gttacggccgccgccgtcagagagacgcacaatgtcgccgtgctcaaccccgaacagcac
atcgccaccctcaccgaagacgttcccctgcatatggagctggaacttcgcatgggcaag
ggctatgtgccggcggaaatgcacgagggcctttccgatgaaatcggcctgatcaagctc
gacgccagcttctcccccgtgcgccgcgtggcgtacaccgtggagcaggctcgcgtgggc
cagatgaccaactacgacaagctcattctggaagtctggactgacggcagcgtctcccct
gaagacgctatcgcctactcggccaagatccttaaggatcagctgacggtcttcatcaac
ttcgatgaagaggtctcccaggaagacggcatcggctcctccctgtcgtccgacctgaac
gagaatctcttcaagtccatcgatgagctggaactctctgtccgcgctaccaactgcctg
aaaagcgccaacatctcgttggtgggcgaactggtgcagcggaccgagaacgatatgctc
aagaccaaaaacttcggccgcaagtccctggacgagattcgtcgcgtcctgcaggacatg
ggcctggaatttggcctgaaagtggacaacttcgagcagcgctaccaggaatggctcaag
aggaaagagcaacatgaggcataa
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