Megalodesulfovibrio gigas: DGI_3117
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Entry
DGI_3117 CDS
T02851
Name
(GenBank) putative Ribonuclease H
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
dgg
Megalodesulfovibrio gigas
Pathway
dgg03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DGI_3117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgg03032
]
DGI_3117
Enzymes [BR:
dgg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
DGI_3117
DNA replication proteins [BR:
dgg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
DGI_3117
Elongation factors (archaeal)
DGI_3117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
AGW14831
UniProt:
T2GFC2
LinkDB
All DBs
Position
complement(3279831..3280409)
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AA seq
192 aa
AA seq
DB search
MDEAGRGCLAGPVVAAAAVFAPAFDFSQLPGLDDSKQVREADRLRLAGEIRRHSLAWAVG
FAWPREIEAVNILQATLRAMRRAVDRLAVRPVFLVIDGNQLLPECPIAQQALVDGDALTP
GIAAASILAKTTRDRVMQALDLRFPGYGFASHKGYGCAAHKAAIRALGPCLQHRMTFRGV
RPEEEQARLPGL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaggccggccgcggctgtctggccgggccggtggtggctgccgctgcagtgttt
gcgccggcgttcgacttttcgcagctgcccggcctggacgactccaagcaggtccgcgag
gcggatcgtctgcggctggccggggagatccggcgtcacagtctggcctgggccgtaggt
tttgcctggccgcgggagattgaggccgtgaacatcctgcaggccaccttgcgggccatg
cgtcgcgccgtggatcgtctggctgtgcggccggtgtttctggtcatcgatggcaatcag
ttgctgccggaatgtcccattgcgcagcaggccctcgtggacggcgacgccctgacgccg
ggcatcgctgcggcgtccatcctggccaagaccacccgggaccgtgtcatgcaggccctg
gacctccgctttcccggctacgggttcgccagtcacaagggctatggctgcgccgcgcac
aaggcggccatccgcgccctgggcccctgtctgcagcaccgcatgacctttcgcggcgtg
cggccggaagaggagcaggcccggctgcctggactgtga
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