Megalodesulfovibrio gigas: DGI_3460
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Entry
DGI_3460 CDS
T02851
Name
(GenBank) putative RNA polymerase, sigma 70 family subunit
KO
K03089
RNA polymerase sigma-32 factor
Organism
dgg
Megalodesulfovibrio gigas
Brite
KEGG Orthology (KO) [BR:
dgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgg03021
]
DGI_3460
Transcription machinery [BR:
dgg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DGI_3460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_11
GIDA_C_1st
GntR
Motif
Other DBs
NCBI-ProteinID:
AGW15139
UniProt:
T2GG03
LinkDB
All DBs
Position
complement(3619151..3620266)
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AA seq
371 aa
AA seq
DB search
MNVRKPSGEAILPSATPSRVVAEAEVLDPEPAEDDESDDLELDEAPEEEFLEEDLPAIDA
SLDPDGEAPPPLALPMPVFKSGPRAGAQDTLRLYLKEIGAFPMLEPEAEFELARRVRDLN
DSDAAFQLVTSHLRLVVKIAMDFQRRWMQNVLDLVQEGNVGLMRAVQKFDPEKGIKFSYY
AAFWIKAYILKFIMDNWRLVKIGTTQAQRKLFYNLNKERRRLQSLGFDPDTATLSKNLNV
SVEEVQEMEQRLGSQDMSLDTTLADDTTTTRLDVLPALQPSIEDTLARAEISIALQGHLE
RILPRLSDKERDILEQRLLADSPVTLREIGERYGITRERVRQLETRLLHKLRVHLTDNID
DFSNDWIVRSE
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcgcaagccatccggcgaagccatcctgccatccgccacgccgtcccgcgtg
gtcgccgaagccgaggtgctggaccccgagccggcagaggacgacgaaagcgacgacctg
gaactggacgaagcccccgaggaggaattccttgaggaagacctccccgccatcgacgcc
tcgctcgatcccgacggcgaagcccccccgcccctcgccctgcccatgccggtgttcaaa
tccggcccgcgtgccggcgcgcaggataccctgcggctgtatctcaaggaaatcggggcg
tttcccatgctggagcccgaggccgaattcgagctggcccgccgcgtgcgcgacctgaac
gacagcgacgccgccttccagctggtcacctcccatctgcggctggtggtcaaaatcgcc
atggatttccagcgccgctggatgcagaacgtgctggatctggtgcaggaaggcaatgtg
ggcctcatgcgcgccgtgcagaagttcgatccggaaaagggcatcaagttctcctactac
gccgccttctggatcaaggcctacatccttaaatttatcatggacaactggcggctggtg
aagataggcaccacccaggcccagcgcaaacttttttacaacctgaacaaggaacgccgc
cggctgcagtccctgggctttgatccggacaccgccaccctctccaagaacctcaatgtg
agtgtggaggaggtgcaggagatggagcagcgcctgggcagccaggacatgagcctggac
accaccctggcggacgacaccaccaccacccggctcgacgtgctgcccgccctgcagccc
agcatcgaagataccctggcccgggcggaaatctccatcgcgctgcaggggcacctggaa
cgcatcctgcccagactctcggacaaggagcgcgacatcctcgaacagcggctgctggca
gattcgccggtcaccctgcgggaaatcggcgagcgctacggcatcacccgcgaacgtgtc
cgccagctggaaacccggctgctgcacaaactgagagtgcatcttacagataacatagac
gatttttcaaacgattggatcgtgcgcagcgaatag
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