Desulfoscipio gibsoniae: Desgi_0013
Help
Entry
Desgi_0013 CDS
T02657
Name
(GenBank) pyridoxal 5''-phosphate synthase, synthase subunit Pdx1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00750
Vitamin B6 metabolism
dgi01100
Metabolic pathways
dgi01240
Biosynthesis of cofactors
Module
dgi_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Desgi_0013
Enzymes [BR:
dgi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
Desgi_0013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
TetR_C_27
IGPS
FMN_dh
Dus
NanE
His_biosynth
NMO
Motif
Other DBs
NCBI-ProteinID:
AGK99637
UniProt:
R4K8Y4
LinkDB
All DBs
Position
14909..15805
Genome browser
AA seq
298 aa
AA seq
DB search
MAETMAEKGTWTVKKGLAEMLKGGVIMDVTTPEQAKIAEEAGACAVMALERVPADIRAAG
GVARMADPTVIIRIMDAVTIPVMAKARIGHFVEAQILEALGADYIDESEVLTPADEQYHI
EKHAFKVPFVCGARNLGEALRRIAEGAAMIRTKGEPGTGNVVEAVRHMRMVMGEIRRVQN
LPKEELMSVAKDMGAPYDLLLDVANNGRLPVVNFAAGGIATPADAALMMQLGCDGIFVGS
GIFKSNDPQSRAKAIVAATTHYNDPKILAEISRDLGEAMPGLEISTIAPEQRMQDRGW
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaccatggcagaaaaggggacatggacagtaaagaaaggtttggcggaaatg
cttaagggcggtgtaatcatggatgttactacaccggagcaagccaaaatagctgaagaa
gcgggtgcctgtgcggttatggcactggaaagggtgcctgctgatatacgtgccgctggt
ggagtagctagaatggccgatcccactgttattatacgtattatggatgcggtaaccatt
cctgtaatggccaaagctagaatcggtcattttgtagaagcacaaatactagaagctttg
ggtgctgattatatagacgaaagtgaagtgcttacaccggcggatgaacagtatcacata
gaaaaacacgcttttaaagtacctttcgtatgtggtgcccgtaatctaggcgaagcgctc
aggcgtattgccgaaggtgcagccatgattcgtaccaagggcgaacccggcacgggcaat
gtggtggaagctgtccgccatatgcgtatggtgatgggtgaaatacgcagggtacaaaat
ttacccaaagaagaattaatgagtgtagccaaggatatgggtgcaccttacgatttactt
ttagatgtagccaacaatggtagattaccggtggttaactttgccgccggtggtattgcg
actcctgcggatgcggctttaatgatgcagttgggttgtgacggtatttttgttggctca
gggatatttaaatccaatgacccgcagtccagggccaaggccattgttgccgctaccacg
cattataatgacccgaaaatactggccgaaatttcacgtgatcttggagaagctatgccc
ggtctcgaaatatccactattgcaccggaacagcgtatgcaagacagaggttggtaa
DBGET
integrated database retrieval system
