Desulfoscipio gibsoniae: Desgi_0055
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Entry
Desgi_0055 CDS
T02657
Name
(GenBank) LysM repeat-containing protein
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dgi01002
]
Desgi_0055
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dgi01011
]
Desgi_0055
Peptidases and inhibitors [BR:
dgi01002
]
Cysteine peptidases
Family C40
Desgi_0055
Peptidoglycan biosynthesis and degradation proteins [BR:
dgi01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
Desgi_0055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
AGK99674
UniProt:
R4KGN1
LinkDB
All DBs
Position
complement(40775..41662)
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AA seq
295 aa
AA seq
DB search
MIKIKMFLTGLLLLFLFNTNPACAADYTVAQGDSLWKISQKYDISVEKIIKINNLQSDLL
AIGQVLKLDDTSKSLPTQAVTAKQNTGYTQQGTYIVQAGDTLSSIAQKIGITIEGIRNLN
NIQGDMIYAGQTLVFNSSSVSRGYVDRPRNEVPQGESYSNRYGQLVDWFEEGINILKPGL
KFTVTDTQTGKTMRFAVLGGSNHCDVEPLTTEDTNSMLDLFKDWTWTPRPVCVQIGGQAI
AASLSGMPHTDIENISNNGVTGHFDMYLYNSQPHGSGISKSYVQQHHDAVLKAAI
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaattaaaatgtttctgactggcttgctgcttttgtttttgtttaacaccaac
ccggcttgcgccgctgactacacggtggcacaaggagattcgctgtggaaaatttcccaa
aaatacgatattagtgttgaaaagattataaaaattaacaatctacaaagtgacctcctg
gccattggtcaagttctcaagcttgacgacacttccaaatccttacctactcaagcagta
acagcaaaacaaaataccggttatacccaacagggcacttatattgtacaagccggggat
acactgagcagcatcgcacaaaaaattggcattaccattgaaggtatacgcaacctgaac
aatatccagggagacatgatttatgccggtcaaacattagtttttaacagcagcagcgtc
tccaggggttatgttgaccgccccaggaacgaagtgccacaaggggaaagctattccaac
aggtatggccagttagttgattggtttgaagaaggaataaacatattaaaaccaggccta
aaatttaccgttaccgatacccagaccggtaaaaccatgcgttttgcagtattgggcgga
tccaaccactgcgatgtcgagcctctgactacagaggacaccaatagcatgttagacctt
tttaaggactggacctggacacccaggccggtttgtgttcagataggaggacaagctatt
gccgcatccctgtccggcatgccccatactgatatcgaaaacatatccaataacggtgta
accgggcactttgatatgtatttgtataacagccaaccccacggctccggcatatcaaaa
tcatatgtacagcagcatcacgatgctgtgctaaaagcagccatttag
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