Desulfoscipio gibsoniae: Desgi_0146
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Entry
Desgi_0146 CDS
T02657
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgi03032
]
Desgi_0146
03036 Chromosome and associated proteins [BR:
dgi03036
]
Desgi_0146
03400 DNA repair and recombination proteins [BR:
dgi03400
]
Desgi_0146
DNA replication proteins [BR:
dgi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Desgi_0146
Chromosome and associated proteins [BR:
dgi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Desgi_0146
DNA repair and recombination proteins [BR:
dgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Desgi_0146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
Peptidase_C80
Motif
Other DBs
NCBI-ProteinID:
AGK99759
UniProt:
R4KGV7
LinkDB
All DBs
Position
126103..126375
Genome browser
AA seq
90 aa
AA seq
DB search
MNKAELIASVAEKSELTKKDAEKAVGAVLASIEEALASGDKVQLVGFGTFEIRERAARKG
RNPQTGEEINIAAARVPVFKAGKALRETVS
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggcagagctgattgccagtgtagccgagaagtccgaattaaccaaaaaagat
gctgaaaaggctgtgggtgcggtgctggcaagtattgaggaagcattggccagtggcgat
aaagttcaactggttggcttcggtacttttgaaatcagggaaagggccgcccgcaaggga
cgcaacccgcaaacaggcgaggaaattaatatcgctgctgcccgtgttccggtattcaaa
gccgggaaagctttgcgcgaaactgtttcataa
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