Desulfoscipio gibsoniae: Desgi_0149
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Entry
Desgi_0149 CDS
T02657
Name
(GenBank) SpoIID/LytB domain protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dgi01011
]
Desgi_0149
Enzymes [BR:
dgi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Desgi_0149
Peptidoglycan biosynthesis and degradation proteins [BR:
dgi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Desgi_0149
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
AGK99762
UniProt:
R4K9B3
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All DBs
Position
127350..128297
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AA seq
315 aa
AA seq
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MRAIKIALVALVSAGLIWGCTNQPQRKPVEPVPGAPNQEPTISLYINEQGIKKNIKLEEY
LAGVVAAEMEPTWPEKALAAQAILARTFTMENIKAGRVKELHGTDASTDIEEFQAYDPSR
INDKVRQAVASTRGQVITYRGDYVKGWFSACDGGISATAQEGLAYTKEPTPYIKSGARDG
CLEITVPENQYWRVELPLQQVRAAVQKINGTDPGNITTVDIVERGPSGRATRIQVGSATV
GAPDLRLALGSDKVRSTLISSARVQGNNLVLEGKGYGHGVGLCQWGANKLASEGKTPQEI
IKFYYRDVDIQKLWD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgcaattaaaatagcactggttgctcttgtttcagccgggttgatatggggttgc
actaatcaaccacagcgaaagccggtggaaccagttccgggagctcccaatcaggaaccc
accattagcctttacatcaatgagcaaggcataaaaaagaatattaaattggaagaatat
ctggccggggtggtggcagccgagatggagcctacttggccggaaaaagccctggctgcc
caggcgatactggcccgcaccttcaccatggaaaatattaaggcggggcgagttaaggaa
ctgcatggaacggacgcgtctaccgacatcgaggagtttcaggcttatgatccctcacga
ataaatgataaagtgcgccaggctgtagcttctacaaggggacaggtaattacctatcgc
ggcgattatgtaaagggttggttctcggcatgtgatggaggcatttccgccacggcacaa
gaggggctggcctatactaaggagcccacaccatatatcaagtccggagcgcgggatggc
tgcctggaaattacagtgcccgagaatcaatactggcgtgtggaattacctttgcaacaa
gtgcgggcagcggtgcagaaaattaacggaacagatccgggaaacataactaccgtggac
attgtggaaagggggccttcgggaagagcgaccaggatacaagttggatctgctacggtg
ggagccccggatttgagactggccttaggcagcgataaagttcgatcaacgttgatttcc
agtgcccgggtgcagggcaataatttagtgctggaaggcaaggggtacgggcacggtgtg
ggactgtgccagtggggagcgaataaattggcctcggaaggtaaaactccccaggaaatc
attaaattttattaccgtgatgttgacatccaaaagctttgggattaa
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