Desulfoscipio gibsoniae: Desgi_0393
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Entry
Desgi_0393 CDS
T02657
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Desgi_0393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgi03021
]
Desgi_0393
03400 DNA repair and recombination proteins [BR:
dgi03400
]
Desgi_0393
Enzymes [BR:
dgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Desgi_0393
Transcription machinery [BR:
dgi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Desgi_0393
DNA repair and recombination proteins [BR:
dgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Desgi_0393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AGK99970
UniProt:
R4KK10
LinkDB
All DBs
Position
356935..357882
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPRIECVETNDEQHYGKFVVEPLERGYGITLGNSLRRILLSSLPGAAVTSVKIEG
VLHEFSTVPGVKEDVTDIILNLKSLCLKMHTDEERIMRIETQQEGPVTAGDILTDPDVEI
LNNDMHIATLAEGGRLFMEMTVSKGRGYVSAERNKKGDHIIGVIPVDSIFTPVRKVNYHV
DNTRVGQRTDYDKLTMEVWTDGSIEADEAVSLSAKILSEHLRLFIGLTESADEVEIMVEK
EEEQKDKILEMPIEELDLSVRSYNCLKRAGINTVEELVQRNEEDMMKVRNLGKKSLEEVM
NKLSELDLKLRNEDD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaattgagaaacctagaattgaatgtgtggaaaccaacgatgaacaacattat
ggtaagtttgtggtggagccgctggaaaggggctacggaataactttgggcaattcgctg
cggcgcattttactgtcctcactacctggtgcggcggtaacctcggttaaaattgaaggg
gtgctgcacgaattttccactgttcccggtgtaaaggaagatgtcaccgatataatccta
aacctcaaatccctttgtctaaagatgcatacggacgaggaaaggattatgcgtattgag
acccagcaagagggtccagtaacagccggggatattctgaccgacccggatgtggagata
ttgaacaacgatatgcacatagccaccctggccgagggcgggcggttatttatggaaatg
accgtctccaaaggccgtggctatgtatcagctgagcgtaataaaaaaggtgaccatatc
attggagttattccggtggactctatatttactccggtgcgcaaggttaactaccatgtg
gataataccagagtgggtcagcgcacggattatgacaaacttaccatggaagtttggacg
gacggcagtattgaagctgatgaagctgttagcttaagcgccaaaatattaagtgagcac
ctgcgtctgttcattggtttaaccgagtctgcggacgaggttgaaataatggtagagaag
gaagaagagcaaaaggataagatactggaaatgcccattgaggaactggatttaagtgtg
cgttcatataactgtctgaaacgggcgggaatcaataccgtggaagaattggttcagcgc
aacgaggaggatatgatgaaggtacgcaacctgggcaaaaaatccctggaagaggtcatg
aataaactatccgagctggatttgaaactgcgcaatgaagatgattaa
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