Desulfoscipio gibsoniae: Desgi_0398
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Entry
Desgi_0398 CDS
T02657
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dgi03016
]
Desgi_0398
Enzymes [BR:
dgi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Desgi_0398
Transfer RNA biogenesis [BR:
dgi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Desgi_0398
Prokaryotic type
Desgi_0398
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AGK99975
UniProt:
R4KK16
LinkDB
All DBs
Position
360850..361593
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AA seq
247 aa
AA seq
DB search
MRNVKLTVAYDGTNYHGFQEQRGTGLATVQEVLELCLGRLAGRRVQVTGAGRTDAGVHAL
GQVVNFDAAGWPIPVERIPLAMNGLLPGDVVVTEAREVGQDFHARFSARAKIYRYTIWNN
RIPSPFNRLYSSFWPVPLNDEAMSQACDHLLGRHDFKCFQASGATVKTTVRTLYRAEVIR
EGTLVHFVFKGDGFLYNMVRIMTGTLLQVGMGKASPDSIRNLLESRQRAQAGPTMPPQGL
CLEHVEY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatgttaaactaaccgtggcttatgacggcactaattatcacggttttcaggag
cagcggggcaccgggttggctaccgtgcaggaggtactggaactttgtctggggagattg
gcggggcggcgagtgcaggtaaccggtgccggtcgtactgatgccggggtgcatgccctt
gggcaggtggttaactttgatgctgcgggatggcccataccggtggaacgcatacccctg
gcgatgaacggcttactgccgggtgacgttgtagtgacggaagccagggaggtggggcag
gattttcatgcccgtttttccgcccgggctaaaatctaccggtataccatatggaataat
cgcattccctccccgtttaatcgcttgtacagcagtttttggccggtacccctaaatgat
gaagctatgtcccaggcctgtgaccacctgttgggccgacatgactttaaatgttttcag
gcatcgggagccactgtaaaaaccactgtacgtacgctgtaccgggcggaagtgatacgc
gagggcactctggtacattttgtttttaaaggcgatggctttttgtataatatggtacgc
ataatgacaggtacacttttgcaggtgggtatgggcaaagccagccccgattcaatcaga
aatctgcttgagtcccgtcaacgggcacaggccgggccgaccatgccgccacagggatta
tgcctggaacatgtcgagtattaa
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