Desulfoscipio gibsoniae: Desgi_0449
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Entry
Desgi_0449 CDS
T02657
Name
(GenBank) putative exonuclease of the beta-lactamase fold involved in RNA processing
KO
K07041
uncharacterized protein
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
Desgi_0449
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B_6
Lactamase_B
WHD_RNase_II
Anti-Pycsar_Apyc1
baeRF_family2
Lactamase_B_3
AurF_N
Motif
Other DBs
NCBI-ProteinID:
AGL00024
UniProt:
R4KBU9
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All DBs
Position
412504..415758
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AA seq
1084 aa
AA seq
DB search
MRYIALGGGSEVGASCNLLQMDGTNILMDAGIRMGGGAAGGPADALPDLALLQEAGGVAA
VLVSHAHLDHIGALPLVHRAYPTVPIYATAPTVHLMRVLLADALKIMSIKAEQELECPLY
DPDLVARMFARVVPVPMGGSVMLPGGIKASFFPAGHILGAAMLGLEGTEGRVLYTGDISA
GNQRTISGMVAPDFAPHLLVMEATYGNRLHANRQREEKTLAQTVAEVISSGGHALIPAFA
LGRAQEIILLILAHQQAGLIPQFPIWVDGMVRSICQAYLNFPELLRGPLKRFINNGGNPF
FRDKGHARPVTATPMREKVLAGAPACIIASSGMLTGGPSQFYASRLVNDPRHAIIFCGYQ
DEESPGHKLLGLADDPDAAITLGGVETRVRCRVDQYGLSAHADAGELASLAARLRPRRVV
LVHGDDGARQALSQTLADSKQSVLTPENGQWLDFSFRRSQRSKFTVGPTQRRDNAVPVHR
RSDPPDLGVLWDELVRRAASRNKLYTAEELAALWFRAEVTPEEQAQVVVMLEDDRRYFAA
DWKHPYFYRSRRPDQVAADRQRESIMLGVPHLPGKLVLVRDGSGAVRAGICYDVDELGFY
AWKVGREGTWHPAESLLEVVGPWYEPGAAEGSSFKSESDRSAEPQFEGKAALQKTRPAKE
NGAVEEQGLVLDESAVRAEQKQRLHRFLLKVQPISRQLKPGELWEKMRNLAAEPVSAGRL
LTLLGLDQDIETLTALAWRLNTHPDYFTRQFTPGDVPLYACCAHVPREQPGLDEEMIDRM
EQNAALAVTEKLFGPESGLYRKGLDLLKGEITLYFHFPALAGALYEQQIEELSVVTGWSV
RVHPEAHHGALADAARQILPQTWQLLRNPSIHREDDRVSVRCEIPPGEEGAAVELVRRFK
ELTGQQLVIETPGGDVSLGFGGAVTANGAAGEIDGAASPAAAGPGDAAMEINAAYAVIRT
VLQQAGAVVYKVGKKRDGGGEYIEISFISPDVGERYREQLEELQKQTGWPVRINPRPNQN
EIKSQVRSALDPSWGLVKEPGFFEKERLVRVKLKNPPAGDDPRWVALVNKISTATGYTLE
CINI
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
ttgcgttatatagccctgggaggcggcagcgaggtgggtgccagctgcaatttactccag
atggatggcactaacattttaatggacgccggtattcgcatgggcggtggtgcagcaggc
ggacccgcggatgcactgccggacctggcgcttttacaagaagcgggcggggtggccgct
gtactggtatctcacgcccacctggaccacattggtgcactgccgctggtgcaccgtgcc
taccctacggttcccatatacgccactgcgcccacggtgcatttaatgcgggtgctgttg
gcagatgcccttaaaataatgtccatcaaggctgagcaggaattggaatgccccctttac
gatcccgatttggtggccaggatgtttgcccgggtggtacccgtgcccatgggaggcagc
gtaatgctgcccgggggtataaaagcatcctttttcccggccggtcatatacttggggcc
gccatgctcgggctggaagggactgaaggacgggtattgtacacaggtgacatatccgca
ggcaaccagcgcaccatatccggtatggtggcacctgattttgcgccccacctgctggtg
atggaagcaacttacggcaatcgcctgcatgccaaccggcagcgggaagagaagactttg
gcgcaaaccgtggcggaagtgatttcctcgggcggtcacgctctcatcccggcctttgcg
ctgggccgtgcccaggagatcatattgctcattttagctcaccagcaggccggtttgata
ccgcagttccccatttgggtggacggtatggtgcgcagcatttgccaggcctacttgaat
ttcccggaattgttgcgcggtcccctcaaacggtttatcaacaacgggggcaatcccttt
ttccgggataaagggcatgccaggccggtaacggctacgcccatgcgggaaaaagtgctc
gccggcgccccggcctgtattattgccagctccgggatgttaaccggcggcccttcgcag
ttttacgcttcccgcctggtgaacgatccccggcatgccattatattttgtggctatcag
gacgaggaaagccccggtcacaagctgctggggctggctgatgatccggatgccgccatt
accctgggcggcgtggaaacccgggtgcggtgccgggtggatcaatatggcctgtccgcc
catgcggatgccggtgagctggcgtcactggcggcccgtctgcggccccggcgggtggta
ctggtgcacggcgatgacggggccaggcaggcactgtcccaaaccctggcggacagcaaa
cagtctgtgttgactcctgagaatggccagtggctggatttttcctttcggcgcagccag
cgcagtaaatttaccgtcggccctacccaacgtagagacaatgcggtgcctgtacaccgg
cgcagcgatccgcccgatttgggagtgttgtgggacgagctagtgcgcagggcggcctcc
cgcaataagctgtatacggccgaagagctggccgccttatggtttagggccgaggtgact
cccgaagaacaggcacaggtggttgtcatgctggaagacgaccggcgctatttcgccgct
gattggaagcacccttatttttaccgctcccgccggccggatcaagttgcggcggacagg
cagcgggagtccattatgctgggtgtcccccacctaccgggcaagctggttttggtgcgg
gatggcagcggtgcggtgcgggcaggcatatgctacgacgtggatgaactggggttttat
gcctggaaggtgggccgggaaggcacctggcatccggcggaaagtttgttggaggttgtt
ggcccctggtatgagccgggtgctgcagagggatcttcatttaaaagtgaatcggaccgg
agtgctgaacctcaatttgaaggcaaggcggcgctacaaaaaaccaggccggccaaagaa
aacggagcggttgaagagcagggactggtgctggatgaaagtgcggtgcgagcagagcaa
aaacaaagattgcaccggtttttattaaaagtacagcctatatcccggcagctcaagccc
ggcgagctgtgggaaaaaatgcgaaaccttgctgctgagccggttagtgcaggccggctg
cttactttgctggggctggatcaagatattgagacactcacggccctggcctggcggctg
aatacccaccccgattattttacccggcagtttacccccggggacgtgcccctttatgct
tgttgtgcccatgtgccccgggaacagccaggacttgatgaggaaatgatagaccggatg
gaacaaaacgctgcgctggccgtgacggagaaactgtttgggccggaaagcgggctgtac
cgtaaggggctggatttgctcaagggagaaataacgttgtatttccatttccctgccttg
gcgggggcattgtacgagcagcaaattgaagaactgagcgttgttacaggctggtcggta
cgggtacatcccgaagcccatcacggtgctctggccgatgctgcccgccaaattttacct
caaacatggcagttgctgcgcaatccctccattcaccgggaagatgaccgggtgagcgtg
cgctgtgaaatccccccgggtgaggagggtgcagctgttgagcttgtgcggagatttaaa
gagctaaccggccagcagctggttatagaaacccccggcggtgatgtgtcacttggcttc
ggtggagctgtaaccgcgaatggcgccgccggtgaaatagacggtgctgccagccctgcg
gctgccggacccggcgacgccgctatggaaatcaatgctgcctatgcagtcatacgcact
gtgctgcaacaggccggggcggtagtttataaggtgggtaaaaagcgggatggcggcggc
gaatatatagagataagttttatcagccccgatgtgggggagcggtaccgggagcagctg
gaagaattgcaaaaacaaactggatggcctgtccgcatcaaccccaggcccaatcaaaat
gaaattaaatcgcaagtgcgctcagccctggatccctcctggggattggttaaggagccg
ggcttctttgaaaaggaacggctggtgcgggttaagttgaaaaatcccccggccggtgat
gacccccggtgggtggccctggtgaataaaatcagtactgcaaccggatatacattggaa
tgcataaatatataa
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