KEGG   Desulfoscipio gibsoniae: Desgi_0546
Entry
Desgi_0546        CDS       T02657                                 
Name
(GenBank) CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dgi  Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:dgi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dgi02048]
    Desgi_0546
Enzymes [BR:dgi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Desgi_0546
Prokaryotic defense system [BR:dgi02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Desgi_0546
SSDB
Motif
Pfam: DEAD ResIII Cas3_HD Cas3-like_C_2 Helicase_C HD-CE PhoH PDC10_C
Other DBs
NCBI-ProteinID: AGL00111
UniProt: R4KKF2
LinkDB
Position
525255..527639
AA seq 794 aa
MKKIKLITPVLLQDARYLAHTRKTGGIRETETLLAHSELTLRYYEVYCEQKRMGEIIQRL
IAACGFRGEEAQTVYLMFLYAIYLHDAGKINPRYQYEVLENASFGADRRQARNTHHALAS
AYIYIDHMYKILLNNPSEAVQKCLAAFAYCICRHHGKLDNGHDFSNLETWDEKYYQSELD
GSIFEYVRYYMQESGVVEQPLSFYILCRLLYALITGCDYCATQEFMTGHSMRPAVIQNGG
ENLKRCYDGSAICRSIRQYQKDPAAFSGNPINALRNQLFLETEQNLLARRDAHIYYLEAP
TGAGKTNMAINLALRVLEMDSKINNVFYIFPFNTLVEQTRKTMHPFFGDQLVVINSITPV
VMGRDDRKDNYEVAWLDHIFNNYPIVLTSHINFFNALFGCGREQCFPLLKLCNSVVILDE
IQSYKNSIWREIISFLQSYAQQLHIKIIMMSATLPQLDQMLRTVDAQFATLVEDPQRYYR
HPLFQGRVRLDFSLLEKGKITLEELKEEVLRFQGKRVLVEFIKKRTAREFYELCKEACNV
VLLTGDDNVARRDQVIRRIDSGEKLILIATQVIEAGVNIDMETGFKDISLPDAEEQFLGR
INRSCLNVGGAVAYFFDLDDASFIYRGDARLSYSIQDPAIRQNLQKKQFGEIYVRVFSDL
IAQTSKANEKNLANLDENCAQFNCKKIEEQMRLIDRNWQLFIPYVWEDLDGYQVWEEFKA
LSGNREMGYAQRMVEYSRLALKMSYFTFSVFRDKIPAGAEEYGGYYFIDGGERFVEDGVL
DREALEKYYGGIFL
NT seq 2385 nt   +upstreamnt  +downstreamnt
atgaaaaagattaaattgattaccccggtgttgttgcaagatgctcgttatctggcccat
accaggaaaaccggcggcatcagggaaacggaaaccctgttggcccattccgaactaacg
ctgcgctattacgaggtgtattgcgagcagaaaagaatgggcgaaattatccaaagattg
attgccgcctgtggttttcggggagaagaagcacaaacagtctatctaatgtttctatat
gccatttatttgcatgatgcgggaaaaatcaatccccgctatcaatacgaggtgttggaa
aacgcatcgtttggagccgatcgcagacaggcaagaaatacccatcatgccctggcttcc
gcttatatttatattgatcatatgtacaagatcctgcttaataatccatcggaggccgta
caaaaatgcctggcagcctttgcctattgtatctgtagacaccacggaaaattagataac
ggacatgatttttctaacctagaaacctgggatgaaaaatattaccaaagcgaactggac
ggcagtatttttgagtatgtccgctattatatgcaggagtctggagtggttgaacagccg
ctcagcttctatatcctgtgccgattgctatacgctttaattacaggctgcgattactgt
gccacacaggagtttatgacaggccactccatgcggcctgcggtaattcaaaatggcggt
gaaaatttaaagcggtgctacgatggcagcgctatctgccggagcattcgtcaataccag
aaagatcccgcagcctttagtggaaatccgatcaatgccctgcgcaatcaattattttta
gaaactgagcagaacttgctggcccggcgagatgcccatatatattacctggaagcacct
acgggggctggaaaaaccaatatggctatcaaccttgccctgcgtgttttggagatggat
tccaagataaataatgtcttttacattttcccctttaataccctggtggaacagaccaga
aaaaccatgcatcctttttttggtgatcaattggtggtaatcaactccatcacgccggtt
gtgatgggtagagacgaccgcaaagataattatgaggtggcctggctggatcatattttt
aacaattatccaattgtcttgacttctcatattaactttttcaatgctttgtttggctgt
gggcgtgagcagtgctttcctttgctcaaactatgcaacagtgtggtgatccttgatgaa
atccaaagttataaaaatagcatttggcgggagataattagtttcctgcagagttatgct
caacagctgcacattaaaatcatcatgatgtcggctacgctgccgcagctggatcaaatg
cttaggacggtggacgcacaatttgccacactggtggaagatccgcaaaggtattacagg
cacccgctcttccaaggaagagttcggctggatttttctctgttggaaaaagggaagatt
actctggaggaattgaaagaagaagttttgcgtttccagggtaaacgagtactggtggaa
ttcatcaagaaaaggacagccagggaattttacgagctttgcaaagaagcgtgtaatgtt
gttttgcttacgggtgacgacaatgttgccaggagggatcaggtcatccggcggatcgac
agcggtgagaaactgattctcatcgccactcaggtcatcgaagcaggtgtcaacattgat
atggaaaccggttttaaagatatctctcttcccgatgccgaagaacaatttttgggaagg
atcaataggtcatgtctgaatgtcggaggtgctgttgcttacttttttgatttggatgat
gcatcgtttatttacaggggggatgccaggctgagctattctatccaggatcctgccata
cggcaaaatcttcagaaaaaacaatttggcgaaatttacgtccgggttttttcagatcta
attgctcaaacaagtaaagccaatgagaaaaacctggctaatcttgatgagaattgtgca
cagtttaattgtaagaaaatagaagagcaaatgcgcttaattgatcgtaactggcagctt
tttatcccttatgtctgggaggacttggacggatatcaggtgtgggaggaattcaaggct
ttaagcggcaatcgggaaatgggctacgctcagcgtatggtggagtattccagattggca
ctaaaaatgtcctactttaccttttcggtattccgggacaaaattcccgccggtgccgag
gaatatggcggctattattttattgatggcggggagcgtttcgtcgaagatggggttttg
gacagagaagcgttggaaaaatattatggagggatatttttataa

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