Desulfoscipio gibsoniae: Desgi_1033
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Entry
Desgi_1033 CDS
T02657
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi03030
DNA replication
dgi03430
Mismatch repair
dgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desgi_1033
03430 Mismatch repair
Desgi_1033
03440 Homologous recombination
Desgi_1033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgi03032
]
Desgi_1033
03400 DNA repair and recombination proteins [BR:
dgi03400
]
Desgi_1033
Enzymes [BR:
dgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Desgi_1033
DNA replication proteins [BR:
dgi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Desgi_1033
DNA repair and recombination proteins [BR:
dgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Desgi_1033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AGL00566
UniProt:
R4KLR3
LinkDB
All DBs
Position
1057625..1060786
Genome browser
AA seq
1053 aa
AA seq
DB search
MTFVHLHTHSEYSFLDGACRLGELVSRAGEFSMPALALTDHGGLHGAIEFYQLARQAGIK
PIIGCEVYLAPDFHLVLLAKNHAGYENLVQLVSRSHLKGLEHKPKVDKNMLACHAGGLIA
LSGCLAGEIPRLLLHGKYAEARGKALEYQAIFSPGNFYLELQNHGLSREIRCNRLLTELA
RETKIPLVATNNVHYLDHKDASIHELLVCIGNLQTVPAPNPLKPTNAEFYLKSAREMRRL
FRETPQAIENTIKISAECNLELPLGSLCLPFFPLPEGVTYGDYLAFLCQQGLNRRYANLT
REIRQRLERELKIIGEMKLAPYFLIVADLVAFAREKKIPVGPGRGSAGGSLVAYALGITS
IDPIENQLFFERFLNPERPDLPDIDLDLCQRRRDEVFSYIHQKYGAGHVAQIGIFSTLGA
RGAVRDVGKALGVPQRMIDLVVTNLPHFSGKGGLEHALATLPEFKTIPVHEEPWQTLIEK
AGSMEGRVRHRSVHPAGVVISRESLNKTVPLQLASGGEIVTQYGPESLEALGLLKIDLLG
LRNLTIIDDTLKLVAHTRGVQLTPEQIPPGDPAAYRLLQNGETLGCFQLESSGMRSLLKK
LKPTNIRDLIALLALYRPGPWDSGMVERFLKRRRGEEPVVYPHSSLEPVLTDTYGIVLFQ
EQVMQVANVAAGYRMGEADLLRRAVAKKSTALKGHESKFIRGCLNNGFGEGEARKIFAFL
TRFAGYSFNKAHSTAYACICYQTAFLKANYPEEYFASLLSSQTGYYNLSVYVEEAKRRGI
KILPPEINRSSACFTVDQGAVRVGLAIIKGVGYKSVREILKARKQGGEFTSFYDFCFRVD
TRVVNRRVLKNLINSGSFDSPGLTRPQLLANTERVLRAVRAAQKTRKAGQLSLMDLGLIA
EDCGIDYELDVPDYSREEKRRLERELLSISIMEHPFARYQRLMNRDKVTRSGQLTGLRTG
NRVTVAGTVVSCRRQPTRNKDYMLILLLEDPFGQVEVILFPGTYQKYLYELNPEGILVRG
KICFEGEQPKVIAESIRSLANLSKPGLVNDSLV
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgtgcacctgcatacccattctgaatacagtttcctggacggcgcctgcaga
ctgggggaactggtctcccgggccggggaattttccatgcctgcacttgccctcacagac
catggcggtcttcatggggccatagagttttaccaattggcgcgtcaggccgggattaaa
cccattattggctgtgaggtttacctcgctccagactttcacttagttctgttggccaag
aaccatgccggttacgagaatcttgttcagttggtaagccgttctcatttaaaaggtctt
gaacataaaccaaaggtggacaagaatatgctcgcttgtcatgcaggcgggctgatagcc
ttgagtggttgtttggcgggagagattccccggttgcttctccatggtaagtatgccgag
gcccggggaaaagccctggaataccaggccatcttcagccccggcaatttttatctggag
ctgcaaaaccacggtttatcccgggaaatcaggtgcaaccggttactgacggaactggcc
cgggaaacgaagattcctttggtggccacaaacaatgttcactaccttgaccataaagac
gcatcaatccatgaactcctggtctgcatcggtaacttgcaaactgtcccggccccgaat
ccccttaaacccactaacgcagagttctatctgaaatctgcccgggaaatgaggcgtctt
ttccgggaaactccgcaagccattgagaacacgataaaaatcagtgccgaatgcaacctt
gagttacctcttggctctctctgtttacctttctttcccctgcctgaaggggttacttat
ggagactatctcgcttttctttgccaacaagggttgaaccgccgctatgcaaacctgact
cgggaaatccggcagcgtctggaaagggaacttaaaatcattggagaaatgaaacttgct
ccttacttcttaattgttgccgatctggtagcctttgcccgggaaaagaagatccctgta
ggacctggccggggctcggccggtggaagtttggtcgcctatgcccttgggattaccagc
atcgatcccattgaaaaccagctcttttttgaacgttttctgaaccctgaaaggcccgac
ctgccggatattgatttggatttgtgccagcgccgcagggatgaagtgttttcctacatc
catcaaaaatatggggccgggcatgtggcccagataggaatcttcagcaccctgggagcc
aggggggccgtccgggatgtggggaaagccctgggcgtgcctcagcgaatgattgatctg
gtggtaacaaatttacctcacttttccggtaaggggggactggaacatgctcttgccacc
ctacccgagttcaaaaccatccctgtccatgaagaaccttggcaaactttaattgaaaag
gccgggagtatggaaggaagggtcagacatcgctccgttcaccctgcgggtgtcgtgatc
agccgggagagtcttaacaaaacagtccctctgcaactggcctcgggaggggaaatcgtc
acccaatacggtccggaaagtctcgaagctttgggcttgcttaaaattgaccttctgggc
ctcagaaacctgaccattatcgacgatacgctgaaactggtggcgcataccaggggcgtt
caattaacgccggagcaaatacctcccggcgatcccgctgcttaccgtttgctgcaaaat
ggcgagaccctgggttgttttcaattggaaagttccggtatgagaagcttgttgaaaaaa
ttaaaaccaacaaacataagggatctgattgccctcctggccttgtaccgtcccggcccc
tgggacagcggcatggtggaacgttttttaaaaaggcggcggggagaagaacctgttgtt
tacccgcattcaagcctggagcccgtcttaacagatacgtacggcatcgttttattccag
gagcaggtgatgcaagtggccaatgttgcggccgggtaccggatgggggaagcggatcta
ttgcgccgggctgttgcgaaaaagtcaacggctctgaaaggtcacgagagtaagtttatc
cggggatgtctgaacaatggtttcggtgagggagaagcacggaaaatctttgcgttttta
acccgttttgcggggtatagttttaataaagcgcacagtaccgcctatgcgtgtatttgt
tatcagacggcttttctgaaagccaactatccggaagaatattttgcttctcttttgagc
agccagacgggatactacaatctgtccgtctatgttgaggaggccaaaagaaggggcatc
aagattttgcccccggagatcaaccgcagttcagcctgttttacggttgatcagggagcc
gtccgggtagggttggccatcattaaaggggttggttataaatccgtacgtgaaatactg
aaagccagaaaacagggaggggagtttacttctttctatgacttttgtttccgggtggat
acaagagtggtcaacaggagggttttaaaaaacctgatcaactcaggctcctttgattcc
ccgggcttaacccggcctcaattgctggcaaacacagaaagggtcctaagagccgtaaga
gcggcccaaaaaaccaggaaggccggacagctaagccttatggatctcggcctgatagct
gaagactgcgggatcgattacgaattagacgtcccggactactcccgggaggaaaaaagg
cgactggaacgggaactgttatccatttcgatcatggaacatccttttgccaggtatcaa
cggctgatgaacagggataaggttaccaggagcggacaactaacaggtctccggacggga
aacagagttacggtcgctgggacggtggtcagctgccggcggcaacccaccagaaataag
gattatatgttgattcttttgctggaagacccctttggacaggtggaagtcattttattt
cccggtacttatcaaaaatacttatatgaactgaaccccgaaggcatactagtaaggggg
aaaatttgctttgaaggcgaacagcccaaggtcatagctgaaagcattcgctccctggcc
aatctttcgaaaccgggattggttaatgatagtttagtttga
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