Desulfoscipio gibsoniae: Desgi_1316
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Entry
Desgi_1316 CDS
T02657
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi03030
DNA replication
dgi03430
Mismatch repair
dgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desgi_1316
03430 Mismatch repair
Desgi_1316
03440 Homologous recombination
Desgi_1316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgi03032
]
Desgi_1316
03400 DNA repair and recombination proteins [BR:
dgi03400
]
Desgi_1316
Enzymes [BR:
dgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Desgi_1316
DNA replication proteins [BR:
dgi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Desgi_1316
DNA repair and recombination proteins [BR:
dgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Desgi_1316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Hda_lid
CRISPR_assoc
Herpes_US9
Motif
Other DBs
NCBI-ProteinID:
AGL00823
UniProt:
R4KCB0
LinkDB
All DBs
Position
1341769..1342782
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AA seq
337 aa
AA seq
DB search
MKYFIDFLTELKKGTIAPVYLLYGPESYLREQAIERLKEYVLPPGGEQLNFEVLDGSVMS
GQEIATAAASTSFIPGRRLVLVRSPQIFQANSGKNEREIKHVLDYLAAPCPGTCLVFETA
QNVDRRKKIYKEMARAGRAIEFTLLKPADLTKWLAKRAREEGCAINREAATELLARCGRD
MYTLYHEMQKLTCYKGPGKTIGLGTVRQLVAPRVEESIFEVVDAIGEKNCVRALSGIRNL
LLQKQQPQQIIGMVARQFRLILQVQGLAGAGQSREQIIAVLKLHPFVYTKIYGQRRNFSV
AQLVMALNNLAELDHYIKTGRADFYPAMETFILKICA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacttcattgattttctaaccgaactaaaaaaaggcactatagccccggtttat
ttactttacggcccggaaagctatttgcgggagcaggctattgagcgtcttaaagagtac
gttttgcctcctggcggggagcaattaaactttgaggtgctggacggttccgtaatgtcg
gggcaggaaatcgctactgccgccgcctccacctcatttataccggggcgacgtctggtg
cttgtacgcagtccgcaaatattccaggctaattcaggaaaaaacgaacgagaaatcaag
catgtgttggattatttagcagccccctgtccgggtacttgcctggtatttgagacggcc
caaaacgtggatcggcgtaaaaaaatatataaagaaatggcccgggcgggacgggctatc
gagttcaccttgttaaagccggccgatcttaccaaatggttggccaagcgggctcgggaa
gaaggctgtgccattaaccgggaggccgcgacggaattattggcccggtgcgggcgtgat
atgtataccctttatcacgaaatgcagaaactgacgtgctataagggaccgggtaaaacc
attggtttggggacagtgcggcagttggtagccccacgggtggaggaaagcatattcgaa
gtggttgatgccataggggaaaagaattgcgtgcgggcactgtccgggatccgtaattta
ctgttgcaaaaacagcagccccaacagatcatcggtatggtggccagacagtttagattg
atattacaggtgcagggattggccggggcgggccaatcacgggagcagatcatagccgtc
cttaaattgcacccttttgtatatacaaaaatttatgggcaacgtagaaatttttcggtg
gcgcagctggtgatggccttaaataatcttgctgagctggatcattatataaaaaccggc
cgggccgatttttaccctgctatggagacttttatcttaaaaatatgtgcttga
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