Desulfoscipio gibsoniae: Desgi_1639
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Entry
Desgi_1639 CDS
T02657
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi03030
DNA replication
dgi03410
Base excision repair
dgi03420
Nucleotide excision repair
dgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desgi_1639
03410 Base excision repair
Desgi_1639
03420 Nucleotide excision repair
Desgi_1639
03440 Homologous recombination
Desgi_1639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgi03032
]
Desgi_1639
03400 DNA repair and recombination proteins [BR:
dgi03400
]
Desgi_1639
Enzymes [BR:
dgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Desgi_1639
DNA replication proteins [BR:
dgi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Desgi_1639
DNA repair and recombination proteins [BR:
dgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Desgi_1639
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desgi_1639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
baeRF_family2
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AGL01111
UniProt:
R4KNA5
LinkDB
All DBs
Position
complement(1668353..1671001)
Genome browser
AA seq
882 aa
AA seq
DB search
MSINKFLIIDGNSLIHRAFHAIPQLSTSDGIITNAVYGFTNMLFKVLQKIEPDYIAVAFD
KGKITFRHASYADYKAQRKATPPELRTQFPLLKEVLRHMRIQTLELENYEADDIIGTLTN
LAESQGIESVVLTGDRDALQLVSPRVRVLLTKKGITEMEEYDEGRVWDRYGVSPTQIIDI
KGLMGDTSDNIPGVPGIGEKTALKLIQEHGTLEDVIAGMEKLPTRWRNKLLEHQDQALLS
KQLATIDRQVPLNIAVQQFKWQGPDYPSLLDIFSRLEFKTLVHSIIDKAGGNNKTGALPG
QAAGSQNELDTHNVEYQKMSTEEELEQIRYAAGASGVAALELTGTREAGINYAALSNDTG
GTIYLLSVREQTGALDTIADICADPQVKKICADGKEALWLLHRHNRTLRGLGFDTRLAAY
LLNPSQSQNTLADLALQYLQLVLPAEGEAAAAARVDVLGRLEQMLHQKLVDTGMDRLYYD
VELPLVSVLADMEMEGVAVDPQILCSMAEETGQQIDSLVLEIYRLAGEEFNINSPKQLGD
ILFNKMGLPVVKKTKTGFSTDASVLEELASSHVIVDKILAYRQLAKLKSTYIDGLFGLIN
PTTGRIHTTFHQDVTATGRLSSSNPNLQNIPIRLQEGRRIRRVFIPHQPGNLILTADYSQ
IELRILAHMSGDLNLISAFKQGQDIHTRTAAEVFNVPMEQVTPEMRSRAKAVNFGIVYGI
SDFGLSRDIKVSRAEAGKYIRSYFERYSGVKEFIDRKIAEARDKGYATTLLNRRRYLPDI
SSRNRVTRAFGERTAINTPIQGSAADIIKLAMVRIHNELKKRQMATKMILQVHDELIFDV
PPEELDTVKNMVTEYMENALQLDVPLVVDLKLGPNWYDVRKV
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
gtgtctattaacaaatttcttatcatagatggcaacagcctgattcaccgggcttttcac
gctattccccagctgtccaccagcgatggcataataaccaatgcagtgtatggctttacc
aacatgctatttaaagtactgcagaaaatagagcccgattatattgcagtggcctttgac
aaaggtaaaatcaccttcaggcatgcaagttacgcggattacaaagcccagcgcaaggcc
accccgccagagctgcgcacacagtttcccctgcttaaagaagtgctgcgccacatgcgt
atccaaacactggagctggaaaattacgaggcggacgatattattggtactcttactaac
ctggccgagtcacagggtatagagtcggtcgtcctcaccggcgatcgtgacgcgctgcag
ctggtttccccgcgggtacgtgtgctgctcaccaaaaagggcattaccgaaatggaagaa
tacgatgaaggtcgggtatgggaccgctacggtgtcagcccgacgcagattattgatatt
aaaggactgatgggagacacctcggacaatattcccggagtgccgggcataggtgaaaaa
accgctctgaaactgatccaggaacacggcaccctggaagatgtcattgccggcatggaa
aaactgcccacccgttggcgcaacaaattattggaacaccaggaccaggcactgttatcc
aaacagctggccactatagatcgccaggtgccgttaaatatagcagttcaacaatttaaa
tggcaggggccggattacccatcactcttagacatattcagcaggctggaatttaagact
ttagtccacagcattattgataaagcaggcggaaacaataagacaggcgcgctgcccggc
caggccgccggtagtcagaatgaactggacactcataatgtggagtaccaaaagatgtct
actgaggaagaactggagcaaattcgctatgcagccggtgcttccggtgtggcggcgctg
gagcttaccggtacccgggaggctgggattaattatgcagccttatccaacgacactggc
ggtactatatatctgctgtcagtccgggaacaaaccggggcgctggacaccatagcggat
atttgcgccgacccgcaggtaaaaaaaatctgcgccgacggcaaagaagccctatggctg
ctgcaccgccacaaccgcacattgcggggcctcgggttcgacacccggctagccgcctat
ctgctcaatcccagccagtcccaaaacacgctggcagatttagccctgcagtatttgcag
ctggttttgcccgccgaaggcgaagctgcggcagcagcccgggtggatgtactagggcgc
ctggagcaaatgttgcatcaaaaactggtggacaccggtatggaccggctgtactatgat
gtggaactgccgctggtgtctgtactggcggatatggaaatggaaggggttgctgtggac
ccccaaatattatgcagcatggccgaggaaacgggacagcagatcgacagcctggtcctg
gaaatttaccggctggcaggtgaagaattcaacatcaattcacccaaacaactgggagat
atactatttaataaaatggggctgccggtagtcaagaaaactaaaaccgggttttccact
gatgcctcggtgttggaagaactggcctcctcccacgttatcgtggataaaatactggct
taccgccagctggccaagctgaaatcaacctatatcgacggccttttcggtctgattaac
ccaaccaccggcagaattcacaccacattccaccaggatgtaactgccaccggacggtta
tccagctccaatcccaatttacaaaacatacccatccggctgcaagaagggcgcaggata
aggcgggtgtttataccccaccaaccgggcaatctgatccttacggcggattactcccaa
attgagctgcgcatactggcgcacatgtccggggacttaaatctaatcagcgcctttaaa
caggggcaggatatccatacccgcactgccgcagaggtgttcaacgtacccatggagcaa
gtgacccctgaaatgcgcagccgggccaaagcggtaaacttcggcattgtgtacggcatc
agcgatttcggtttatccagagatatcaaagtcagccgtgccgaggcaggtaaatacatc
cgcagttactttgagcgttactccggcgttaaagaatttattgaccggaaaatcgccgag
gcccgtgataagggttacgccaccaccctgctcaaccgccgccgctatctgcctgatatt
tcaagccgcaaccgggtgaccagagccttcggtgagcgtacagccatcaatacgcctatc
cagggcagtgctgcggacataattaagctggcgatggtaagaatacataatgaattaaag
aaacggcaaatggccacaaagatgatcttacaggtacacgacgagttaatctttgacgta
cctcccgaagaactggatactgtaaagaacatggttacagaatacatggaaaatgctctg
cagctggacgtgccgctggtggtagatttaaaattgggccccaactggtatgacgttaga
aaggtgtaa
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