Desulfoscipio gibsoniae: Desgi_1841
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Entry
Desgi_1841 CDS
T02657
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgi03021
]
Desgi_1841
03009 Ribosome biogenesis [BR:
dgi03009
]
Desgi_1841
Transcription machinery [BR:
dgi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Desgi_1841
Ribosome biogenesis [BR:
dgi03009
]
Prokaryotic type
rRNA transcription factors
Desgi_1841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_NusA_C
KH_1
KH_2
S1_2
MRP-S35
Motif
Other DBs
NCBI-ProteinID:
AGL01289
UniProt:
R4KFB8
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All DBs
Position
1879312..1880394
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AA seq
360 aa
AA seq
DB search
MNTEFLEALKDLEREKGISANVLLEAIEAALLSAYKRNFGSLQNAKVLLDRESGDCKVYA
QRNVVEEVLDPRLEISLSEARAIDPLYNLGDVVETEVTPRNFGRIAAQTAKQVVVQRIRE
AERNIIYEQFANREGDIISGVVQRIEQKNAFIELGKTEAILTPAEQIPGETYAQGDRVKA
YIVEVKKTTKGPQIFVSRTHPGLLKRLLELEVPELQEGVVELKSVAREAGYRSKIAVFSR
DENVDPVGACVGPKGMRVQTIVNELHGEKLDIIKWDPEPSKFVASSLSPAKVVAVEIWED
EKVARVIVPDYQLSLAIGKEGQNARLAAKLTGWKIDIKSESQMAELYPDYKDLFAEEFIE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgaatttttggaagccctgaaggatcttgaaagagaaaaggggatttccgct
aatgttttgctggaggcgatagaggctgcgctgctttcagcgtataaaagaaattttgga
tcactgcaaaatgccaaggtgcttttggacagggaatcaggcgattgtaaagtctacgcc
cagaggaatgttgttgaagaggtactcgatccacgcctcgaaatatcgctatctgaggcc
agggccattgatcccctatacaatttgggtgatgtggtggagacggaggttacgccgcgt
aattttggacggatagcggcccaaacagccaagcaggtggtggtgcagcggattcgcgaa
gccgagcgcaacataatatatgagcaattcgccaaccgggaaggtgacattataagcggc
gtggtgcagcggattgaacaaaagaacgcttttattgaactgggcaaaacagaggctata
ttaacaccagcggagcaaataccaggtgaaacctatgctcagggtgatcgggtgaaggcc
tacatagtggaggtgaaaaaaaccaccaaggggccgcaaatctttgtttcccggacgcac
cccggacttttaaaaagactccttgaactggaggttcctgaactgcaggaaggtgttgtg
gagttgaaatctgtagctcgtgaggcaggctatcgctctaaaatagctgttttttccaga
gatgaaaacgtggatccagtgggagcatgtgtcggtccaaaggggatgcgtgtgcagacc
atagttaatgaactgcacggtgaaaaattggatatcattaaatgggaccctgagccatct
aaatttgtggctagctcacttagcccggccaaagtagtggccgttgagatttgggaagat
gaaaaggtggcccgggtcattgtacctgattaccagctttccttagctattggaaaagaa
gggcaaaatgctcgcttggctgctaagttgacgggttggaagatagatataaaaagtgag
agccaaatggctgaattatatcctgattataaagatttgtttgccgaggaatttattgaa
tag
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