Desulfoscipio gibsoniae: Desgi_1847
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Entry
Desgi_1847 CDS
T02657
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dgi03016
]
Desgi_1847
Enzymes [BR:
dgi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Desgi_1847
Transfer RNA biogenesis [BR:
dgi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Desgi_1847
Prokaryotic type
Desgi_1847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AGL01295
UniProt:
R4KL89
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All DBs
Position
1885069..1885989
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AA seq
306 aa
AA seq
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MSMDGILNVLKPPGMTSHDVVGYVRKVTGQKKTGHTGTLDPGAAGVLPVCLGKATKIIQF
LPDDKCYRAEITFGKSTSTQDSFGDVLKSDGAYGINATDIEQELKSFKGWINQIPPMTSA
IKHHGKKLYELARAGIEVERKPRTVYIHEIALMNFNDDKIFPSAILHIHCSAGTYVRTIC
HDLGEKLGCGAYMSFLLRTRAGVFALEDTITLEQLTEPSGLDMETLLVPMGRALAYIPVV
DLDNRSARAISCGNSITLPVHILASRLVAKQLVRLERAGVLIALAAVKDDPNMSEHYMLQ
PVKVLV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggatggtattttaaatgttcttaaacccccgggcatgaccagtcatgatgtg
gtaggttatgtcagaaaagtcaccggtcaaaaaaaaacgggccatacggggacattagac
ccgggggctgctggtgtgctgcctgtttgcctgggaaaggctactaagattatacagttt
ctgccggatgacaaatgttaccgagcggaaataacctttggtaaatccaccagcacccag
gattcttttggcgatgtacttaaatcggacggcgcgtatggtataaatgctactgatata
gaacaagaattaaagagttttaaagggtggattaatcaaataccaccaatgacatcggcc
atcaaacaccatggcaaaaaactttatgaactggctagggctggtattgaagtggaaagg
aagcctcgtactgtttacatacatgaaattgcgctgatgaattttaatgatgataagata
ttccccagcgctattttgcatattcattgttcagcgggcacttatgtgcgcacaatttgc
catgatctgggggagaagctgggttgtggcgcttatatgtcttttttgttacgtacccgg
gcgggggtgtttgcattggaggatactattaccctggagcagctgaccgagcctagcggg
ctggatatggaaacattgctggtgcccatgggcagagcgctggcttacattcccgtagtt
gatcttgataacagatcagcaagagctattagctgcggcaacagtattacgctgccagtt
catatcttggcaagccggctggttgccaagcagttggttcgcctggaaagggcaggcgta
ttaattgccctggcggctgttaaagatgaccctaacatgtcggagcattatatgcttcaa
ccggttaaagtactggtttaa
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