Desulfoscipio gibsoniae: Desgi_1856
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Entry
Desgi_1856 CDS
T02657
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00550
Peptidoglycan biosynthesis
dgi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Desgi_1856
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dgi01002
]
Desgi_1856
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dgi01011
]
Desgi_1856
Enzymes [BR:
dgi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Desgi_1856
Peptidases and inhibitors [BR:
dgi01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Desgi_1856
Peptidoglycan biosynthesis and degradation proteins [BR:
dgi01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Desgi_1856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Peptidase_S13
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AGL01304
UniProt:
R4KFD2
LinkDB
All DBs
Position
1892295..1893446
Genome browser
AA seq
383 aa
AA seq
DB search
MHLSRFAITLVVFFCVLVTFIYTSPGLANDQEQLVHISAQSALLLDVANGQILYDKNDRE
PRAMASTTKIMTAVVALGGADIKGTVTVSPRAAAVGESSMYLEPGEKLTLEQLLYGALLR
SGNDACVAIAEHVAGTEESFVLLMNEKAVLLGAEATSFRNTNGLPAQGHYSTAYDLALLA
RYALHDPAFCRIVKTRAQVIEGPGGISHYLKNTNKLLWHYPGADGVKTGTTEAAGKCLVA
SATRGDRHLLAVILNGSDRFADASRLLDYGFGEFKAVQTVYAGAVYERVNVTDGVSDTVP
VKALDDITVDLRVDGTDRLEKKIKLLRNISAPVYDGQPLGKICVYVNGIQVGATNIVAGC
TIEKTTLWQKAARIMKNACSKNL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaagcaggtttgctataacattggtggtatttttttgtgttttggtcacattt
atatatacttcgcccgggctggccaatgatcaagagcagcttgtgcatatcagtgcccag
tcggcattattgctggatgtggctaacgggcaaattctctatgataaaaacgacagggag
ccaagagctatggccagtacgactaaaataatgacggctgtggtggcccttggaggtgcg
gatattaaaggaactgtaacggttagtccccgggccgccgcagttggggaatcttccatg
tatcttgagccaggggaaaaacttaccctggaacagctgttgtatggtgcactgctgcgt
tccggtaatgatgcttgtgtagctatcgccgaacatgtagccggtactgaggaatccttt
gtactattgatgaatgaaaaggcggtactgctgggggccgaagccaccagctttcgcaat
actaatggtctaccggcacagggccattattccactgcttatgatcttgcgttgctggcc
cgttatgccctgcatgacccggcattttgccggattgttaaaactcgtgcccaggtgatc
gagggacctggaggtattagccattacttaaaaaatactaataaattgctttggcattac
cccggggctgacggtgttaaaacaggtaccactgaggcggcaggcaagtgcctggtagct
tctgccaccaggggggacaggcatttactggcagtaattttaaatggtagtgaccgtttt
gcagatgccagccggctactggactatggcttcggtgaatttaaagctgtgcaaactgtt
tatgccggtgcagtgtatgaacgggttaatgttactgatggggttagcgatacggtaccg
gttaaagcattggatgatattacagttgatttacgtgtggatggaacggacaggttggag
aaaaaaattaaactgttgcgtaatatcagtgcaccggtttatgatgggcagcctctgggt
aaaatttgtgtgtatgttaatggtatccaggtaggtgccactaatattgtggctggctgt
acaattgagaaaacgactttatggcagaaggctgccagaataatgaaaaatgcttgttct
aaaaatttatag
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