Desulfoscipio gibsoniae: Desgi_2040
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Entry
Desgi_2040 CDS
T02657
Name
(GenBank) NADPH-dependent glutamate synthase beta chain-like oxidoreductase
KO
K03388
heterodisulfide reductase subunit A2 [EC:
1.8.7.3
1.8.98.4
1.8.98.5
1.8.98.6
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00680
Methane metabolism
dgi01100
Metabolic pathways
dgi01120
Microbial metabolism in diverse environments
dgi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Desgi_2040
Enzymes [BR:
dgi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.7 With an iron-sulfur protein as acceptor
1.8.7.3 ferredoxin:CoB-CoM heterodisulfide reductase
Desgi_2040
1.8.98 With other, known, physiological acceptors
1.8.98.4 coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase
Desgi_2040
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
Desgi_2040
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
Desgi_2040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_3
NAD_binding_8
Pyr_redox
DAO
Fer4_20
FAD_oxidored
FAD_binding_2
Fer4
Thi4
HI0933_like
Amino_oxidase
NAD_binding_7
FAD_binding_3
GIDA
AlaDh_PNT_C
Fer4_7
Fer4_10
Fer4_6
Fer4_9
Fer4_2
F420_oxidored
Fer4_21
Lycopene_cycl
Fer4_16
Fer4_4
Fer4_8
Fer4_15
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AGL01481
UniProt:
R4KPB5
LinkDB
All DBs
Position
complement(2083526..2087947)
Genome browser
AA seq
1473 aa
AA seq
DB search
MSKDKVGAVMVVGAGISGIQASLDLAESGYYVYLVEQSPAIGGTMPRLDKTFPTNDCSMC
ILSPKLVECGRHLNIEKNMLTDIVDVQGEPGNYKVKLRKKARYIDLDKCTGCGECASACP
VEMPSEFDADLGKRKAIYKMYPQAMPAGFSIEKHGVSPCKAACPAGVNAQGYVQLIKDGK
FIESWQLIYKDNPLPAICGRVCTHPCESQCHRKSVDKSVNIRELKRVAASVAYRDMDNLP
LPETAPANGIKVAVIGSGPAGLSTAYQLTKRGYAVTIFEALPVTGGMLRVGIPEYRLPKQ
LVELEINLLEKMGVQFKTNTPLGPQLTIDDLMNQGYKAVFLAIGAHKGVSLNIPGEDLSG
VIPGVDFLRKVNLGEQVPLGQKVAVIGGGNTAMDAARTALRCGAQEVTIVYRRSEAEITA
AEEEIEEAKEEGIIFKMMTSPVAVHGQDGKAIKLECVENKLGEPDESGRRRPVPVAGSEF
SIDVDNVIIAIGQAPEVSGLSNVALSKKNTIIVDPQTLATNIPGVFAAGDVVTGPATVVD
AIGAGKKAAWSINLYLKGEQIAGEFKNTFDGAIADFPKHAQKMMSDTPRVTGHFVDPQQR
IANFYEVALGISEEEARKEAERCLNCAVCSECGECVKTCMREAVNHNMQDEEKEIEVGSI
ILSSGAELCDPTDLYYFGYKKYPNVVTSIEFERILSASGPFSGHLVRPYDHQEPRKIAWI
QCVGSRNIRIKHNYCSSVCCMYAIKEAVIAKEHSAEPLDTTIFMMDMRSYGKDFEKYYER
AKNEHGVKFKRSRIYEIAEAAGESKNLVIRYANEDGTITTEEFDMVVLSIGFKAPQKALE
LGQKLDVKLNRYGFADLEPLTGVGTSQPGIYVAGTFSGPKDIPETVMQASAAASAAESLL
GDVRGTLVKERVFPPERDVTDEEPRIGVFVCNCGINIGGVISVPEVVAMAKKLPNVAYAG
EYLYACSQDSQADMKQIIEENKLNRVVVASCSPRTHKPLFQETLREAGLNRYLFEMANIR
DQCSWVHMHEHDKVTEKAKDLVRMIVSKSALLRPVKQGQVGVTKSALVIGGGVSGMTNAL
SLAEQGYTVHLVEKSAELGGMARRIKKGFKGEDIGAFVADLINQVNASPLINVYTSSEIQ
EVSGYVGNFTTALTNGQVIKHGVTVIAIGGQEYKPGEYLYGQSDRIMTHLELEEAMAEGK
VKDAQNIVLINCVGSRNNERPYCSRVCCSKSISLALKAKESNPNANIFVLYRDIRTYGFL
EEKYEEARNKGVIFIRYNTDDKPLVEKNGDMINVTVTDHVLGVPIVIEADVVGLAAAILP
PEDNTKLNQLFKVPLNADGFFLEAHMKLRPVDFASEGLFMAGIAHGPKNMEENIAQAKAA
AGRAATILSKNHLESQGVVAKVDPSKCAACLTCVRLCPFNVPRVKNYAAEIEPVLCQGCG
TCAGECPNKAITLQGYSDRMYMNMMNGLLREVR
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagataaagtgggagccgtaatggtggtaggcgccggcatttccggcatccag
gcatcacttgaccttgcagagtccggctattatgtatatctcgtggagcagtcaccggct
attggcggcactatgcccaggctggataaaacattccccaccaacgattgctccatgtgt
attctctctcccaagctggtggagtgcgggagacacctgaatattgagaaaaacatgtta
acagatatagttgatgttcagggtgagccgggcaactataaggtgaaattacgtaaaaaa
gcgcgttacattgatctggataagtgtactggctgcggcgaatgcgccagcgcctgcccg
gtagaaatgcccagcgaatttgacgccgacctgggcaagagaaaagctatttataaaatg
tatccccaggccatgccggccggcttttccatagaaaaacatggtgtttccccctgtaaa
gcagcctgccctgcaggggtcaacgcccagggttatgtacagcttattaaagatggtaaa
ttcattgaatcgtggcaattgatttataaagataacccgctgcccgccatttgtggccgg
gtatgcacacatccttgcgaaagccagtgccaccgtaaaagcgtggataagtccgttaac
ataagggaattaaagagagtagccgcatccgtagcctaccgtgatatggataacttaccg
ttacctgaaacggcaccggctaatggtattaaagttgcggtgataggctccggcccggca
ggtctttccacggcttatcaactaaccaaacggggctatgcggtaactatatttgaagcc
ttgccggtgaccggtggcatgctcagggttggtataccagagtatcgcctgcccaaacaa
ttagttgaactggaaataaacctgctggaaaaaatgggtgtacaattcaaaacaaacacc
cccctgggtccgcagttaaccatagatgatttaatgaaccagggttacaaagctgtattt
ttagccattggtgctcacaagggcgtatccctcaatataccgggtgaggatttgtccggc
gtaataccaggtgtagattttctacggaaagttaacctgggcgagcaggtccccctgggt
caaaaggtagctgtcatcggtggcggcaatactgctatggacgctgcccgcaccgcactg
cgctgtggtgcccaggaggtaaccatcgtataccgccgatccgaagcagagattacggca
gcagaagaggaaatcgaggaagccaaagaagagggcattatctttaagatgatgaccagc
ccagtggctgtacacggacaagacggtaaggccattaaactggaatgcgttgaaaacaag
ctgggtgaaccggacgaaagtggacgccgccgcccagtgcctgtggcgggcagtgaattt
tccattgatgtggataacgtgatcattgccattggccaggctccagaggtatcaggatta
agcaacgtggccttatccaaaaagaataccataattgttgatccccaaacgctggccacc
aatataccgggtgtttttgccgccggcgatgtggtaaccggtcctgccaccgtggtggat
gccatcggagcgggtaaaaaagcggcctggtctatcaacttataccttaaaggcgaacaa
atagccggcgagttcaaaaatacctttgacggtgctattgctgactttcccaagcatgcc
cagaaaatgatgtcagataccccccgggtaacgggtcattttgtggacccccaacagcgc
atcgctaatttttacgaagtggctttgggcatcagcgaagaagaggcccgcaaggaagcc
gagcgctgcctgaactgcgccgtatgttccgaatgcggtgaatgtgtaaaaacctgtatg
cgcgaggccgtcaaccacaatatgcaggatgaagaaaaagaaattgaagtaggatctata
attctcagcagcggtgctgaattatgcgaccccaccgacctttattatttcggttataaa
aagtatcctaatgtagtaaccagtattgaatttgagcggattttaagtgcttcgggtccc
tttagcgggcacctggttcggccctatgaccaccaggaaccgcgcaaaatcgcctggatt
cagtgtgtgggctcgagaaacatccgcattaaacacaactactgttcctcggtgtgctgc
atgtacgccattaaggaagcggttattgccaaagaacacagcgccgagccacttgatacc
accatctttatgatggatatgcgctcatatggtaaggactttgaaaaatattatgagcgg
gctaaaaacgagcacggcgttaaatttaaacgctcgcgcatttatgaaatagccgaggca
gctggggaaagcaaaaacttggtaattcgctatgccaatgaagacggcactattaccaca
gaagaatttgacatggtggtactgtctataggctttaaagctcctcaaaaagctctggaa
ttgggacaaaagctggatgttaagctgaaccggtatggttttgcggatctggaaccgctg
acaggcgtgggcacttctcaacccggcatatacgtagcaggtaccttctcagggcctaaa
gacatccccgaaactgtaatgcaggccagcgcagcggcttccgccgctgaaagtttgcta
ggcgatgtgcggggcaccctggtcaaggaaagggtattccctcctgagcgtgatgtaact
gatgaagagcccagaataggggtatttgtatgtaactgtggtattaacattggcggtgtc
atcagcgtccccgaagtggtggccatggctaagaaactgcccaatgtagcttatgccggt
gaatacttgtacgcctgttcccaggacagccaggcagatatgaaacaaataatcgaagaa
aataaacttaaccgggtggtagtggcctcatgcagtcccagaacccacaaaccactgttc
caggaaacactgcgggaagccggtttaaaccgctacttgtttgagatggccaatatccgg
gaccagtgctcctgggtgcatatgcatgaacacgataaagtcaccgaaaaagccaaagat
ttggtgcgtatgattgtatctaaatcggccctcttaaggcccgttaaacagggccaggta
ggggtgaccaagtctgcactggtcattggtggcggcgtctccggaatgaccaacgcatta
agcctggcggaacagggttatacagtgcacctggtggaaaaatccgccgagctgggcggt
atggccaggcgcattaaaaaaggctttaaaggcgaagacattggagcctttgtagcagat
ctaattaatcaagtaaacgccagcccattaattaatgtttatacttcctcggaaatacag
gaagtatccggttacgtaggtaacttcactaccgcactgactaacggccaggtcattaaa
cacggcgtaacggtaatcgccattggtggccaggaatacaagcccggtgaatacctgtac
ggccaaagcgaccgtataatgacccacctggagcttgaagaagctatggccgaaggtaaa
gtcaaagatgctcaaaatattgtactgatcaactgtgtgggctccaggaataacgagcgc
ccttactgcagccgggtatgctgttccaagtccatcagcctggcgctgaaagccaaggaa
agtaatcccaatgccaatatatttgtcttataccgtgatattcgcacctatggcttcctg
gaagaaaagtatgaagaagcccgcaacaagggcgttatattcattcgttataataccgat
gataaaccgctggtggaaaagaacggggatatgataaacgtcaccgtgactgaccatgtg
ctgggtgtaccgatcgttattgaagccgatgtggtgggactggccgccgccatactgcca
ccggaggacaataccaaactaaaccagctgtttaaagtacccttgaacgcggatggcttc
ttcctggaagcgcatatgaagcttcgccccgtggactttgcctccgaaggcctgtttatg
gctggtattgcccacggtcccaaaaacatggaggaaaatatcgcccaggccaaggccgcc
gcaggacgagctgccaccatattaagcaagaaccacctggagtcccagggtgttgttgcc
aaggtggatcccagtaagtgtgcagcttgccttacctgtgtaaggttatgtccgtttaac
gtaccccgcgtgaaaaactatgccgctgaaattgagcccgtactatgtcagggatgcggt
acctgtgccggcgagtgccccaacaaggctatcacgctgcagggctacagcgaccgcatg
tatatgaatatgatgaatggtttattaagggaggtgcgttaa
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