Desulfoscipio gibsoniae: Desgi_2108
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Entry
Desgi_2108 CDS
T02657
Name
(GenBank) selenocysteine-specific elongation factor SelB
KO
K03833
selenocysteine-specific elongation factor
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dgi03012
]
Desgi_2108
Translation factors [BR:
dgi03012
]
Eukaryotic type
Elongation factors
Desgi_2108
Prokaryotic type
Desgi_2108
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_3rd_SelB
WHD_2nd_SelB
Beta-barrel_SelB
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
HflX_C
OB_DPOA2
Motif
Other DBs
NCBI-ProteinID:
AGL01542
UniProt:
R4KIV0
LinkDB
All DBs
Position
complement(2156094..2158013)
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AA seq
639 aa
AA seq
DB search
MKHIIIGTAGHVDHGKTVLIKALTGVDTDRLKEEKERGISIELGFAYLKLASGQTAGIID
VPGHERFIKNMLAGVGGIDIVLLVIAADEGVMPQTREHLDIIQLLNVKRGVVVITKKDLV
DEEWLDMVTEDVRDFIKGTVLEKAPLINVSAVSGEGIDELKLVIDQLAADIKENKSAGPP
RLPVDRVFTVTGFGTVATGTLLSGQIKTGDNLQIYPAGGVYRVRNLQVHGHKVDTAEAGQ
RVAINLSGLETSELNRGQVLALSGSLHPAHRLDVKLQYLSSAPKPLKHRARVRVYLGTAE
VLGRVILLDREELEPGAETYIQLQMEEPVATARGDHLVIRSYSPMRTIGGGLVIDPTAVK
HKRYRDELIEALATAEKGTPTELLEQYLAAGARLYTPSDLISGTGLAAETAASALQDLLD
QGRAVELAHEGEKAYLSGRLIAEWTDKIKKALTEYHQKFPLREGYPKEELRSRLFPTLNN
KQFQMLLVCLEQNGHIDLHANSVIAHGFIPQPGPALSTGVKRLEEIYLAGMYQPPGWSDA
ARQAGITKDDQEVLNYLLARGTLVKVADGLFFHQRALSEATNLIKQHLAQRGELLLGEVR
DILQTSRKYALPLLEYLDKEKITRRVGDKRVAGRALSDR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatatcattatcggtacggcaggccatgtggaccacggtaaaacggtactcatc
aaagcgctaacaggcgtagacaccgaccgtcttaaagaagaaaaggaacgtggtatttcc
attgaattaggttttgcatatctcaagctggcaagcggtcaaaccgcaggcatcattgac
gtgcccggtcacgaaaggtttattaaaaacatgctggccggtgttggtggcatagatatt
gttttattggtcatcgccgcagacgagggagtcatgccccaaaccagggaacacctggat
attattcagctgctcaatgttaaacgtggtgtggtggtgatcaccaaaaaggatttagtg
gatgaagaatggctggatatggtcaccgaagatgtccgcgattttattaagggcacggta
ctggaaaaagcaccccttattaacgtatctgcagttagcggtgagggtattgacgaactg
aaattggtgattgatcaattggccgctgatataaaggaaaataaatccgcgggaccgccc
cgcctgcccgtggaccgtgtttttaccgtcacaggatttggcacggtggccacgggtacg
ctgctttcgggacaaatcaaaaccggggacaacctgcagatttacccggcaggcggggta
taccgggtgcgcaatcttcaggtgcacggacataaggtggatactgccgaggccggccag
cgagtggccatcaacttatccgggctggaaaccagtgaactgaaccgcggtcaagtttta
gctttatcgggcagcctgcaccccgctcaccggctggacgttaagttgcagtatttatcc
agtgcacccaaaccattaaaacaccgggccagggtgcgggtatacctgggcacggcggaa
gtactgggcagggtgatcctgctggaccgcgaagaactggagcctggtgcggaaacatat
attcagctgcagatggaagaaccggtagcgacggccagaggggaccacctggtgattcgc
tcctattcacccatgcgcaccattggcggagggctggttatcgaccccacagcagtcaag
cataaacgctaccgggacgagcttatcgaagcactggccaccgcagaaaaaggcaccccc
accgaactgcttgagcaatatctggcagctggcgcccgcctatacacaccgtccgattta
atctcaggaaccggcctggcagcagagactgcggccagcgcactgcaggatttacttgat
cagggacgggccgtggagctggcccatgaaggagaaaaagcttacctatccggccggtta
atagcggaatggacggacaaaattaaaaaagctctgacggaataccaccaaaaattccct
ctgcgagagggataccccaaggaggagctgcgctccaggttgttccccacccttaacaac
aagcaatttcaaatgctgcttgtttgcctggaacaaaacggtcatatcgatttacatgct
aatagtgtaatcgcccatggttttataccgcagcccggacctgccttaagtaccggcgtt
aaacgtctggaggaaatatacctggccggcatgtaccaaccaccgggttggagcgatgca
gcccggcaagcgggcataactaaagatgaccaggaagtgctgaattacctgctggcccgg
ggtacgttggtaaaagttgcggatggcctatttttccaccagcgggcgctttcagaggca
actaacttgataaaacaacacctggcccaaaggggagaattattgctgggtgaagtgcgg
gatatacttcaaacttcccgcaaatacgcgctgccgctgcttgagtacctggacaaggaa
aaaatcacccgtcgggtgggggataaacgtgttgcgggcagggcattgtcagatagatga
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