Desulfoscipio gibsoniae: Desgi_2109
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Entry
Desgi_2109 CDS
T02657
Name
(GenBank) seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00450
Selenocompound metabolism
dgi00970
Aminoacyl-tRNA biosynthesis
dgi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Desgi_2109
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Desgi_2109
Enzymes [BR:
dgi01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
Desgi_2109
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GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AGL01543
UniProt:
R4KEE7
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Position
complement(2158010..2159449)
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AA seq
479 aa
AA seq
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MSVNNHTRLLRQIPAVDEVLKDPVIADLVRSVPRPLVLKAIRDTIIQLREELAANRLQEQ
PEQQARDFFMGIIVQRAVYRARSQNRPNLRRVLNATGVVLHTNLGRAVLGESARQAINNA
ASGYSNLELDLATGKRGSRYAPVEHLLTQLTGAEAALVVNNNAAAVLLALGTLARGREVI
VSRGQLVEIGGSFRIPEVMAQSGARLVEVGATNKTYATDYQKAITPETALLLHVHTSNYR
IVGFTRETSIAELVELGRDTKLPVMSDLGSGSLVNLGTCGLPAEPTVQQVVKDGADVVTF
SGDKLLGGPQAGIILGKKEYLDRMKKNPLTRAVRIDKFTVSALEATLREYIDLQTAWQRI
PTLNMLTADINILRQRAQSLSAELTAAAGDQALFTPVQTPSAVGGGALPTADLPSWAVEV
APRCMTVFELAASLREAEPAVIGRLQDEKLLLDVRTLLPGEETALVEVLVGVLKGGVAS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaaataaccatacccgcttgctaaggcagataccagcggtggacgaggtgctt
aaagatcccgtcatagcggacttggtccggtcagtgccacgaccgctggtgctaaaagca
attagggataccattattcaattaagagaggaactggcggcgaaccggttgcaggagcag
cccgaacagcaggcccgggacttttttatgggcataattgtacaaagagcggtttaccgt
gcccgttcccaaaaccgccccaacctgcgccgggtgctcaatgccaccggggtggtgctg
cataccaacctggggcgggcggtgctgggggaaagcgcccggcaagccattaataatgct
gcatcgggttattccaacctggaattggatctggccaccggtaaacggggatcgcgctat
gccccggtggaacatttacttacccaactgaccggtgccgaggccgcgctggtagtaaac
aacaacgccgccgccgtactgctggctctgggcaccctggcacggggccgggaagtgatt
gtttcccgggggcagctggtggaaataggaggctcctttcgcatacccgaagtaatggcc
cagagcggtgcccggctggtggaagttggtgccaccaacaaaacctatgccaccgactac
cagaaggccataaccccggaaacggcattattgttgcatgtacataccagtaattatcgc
atagtgggattcaccagggaaacttccatcgccgaactggttgaacttggccgggacacc
aaactaccggtgatgtccgacctgggcagcgggtcactggtgaatctgggcacctgcggg
ctacctgcagagcccactgtgcagcaagtggtcaaagacggtgccgatgtggtcactttt
tccggggacaagctgctgggcggcccccaggcgggcattattttaggtaaaaaggaatac
ctggatcgcatgaaaaagaaccccctcaccagggcggtgcgtattgataaatttaccgta
tccgccctggaggccaccctgcgggaatatatcgacctccaaacggcctggcagcgcatc
cccaccctgaatatgcttaccgcggacatcaatatattgcgccaaagagcacaatcttta
agtgcagagctgaccgccgcagccggtgaccaggctttattcaccccggtacaaacgcct
tcagcagtggggggaggggctttgcccactgccgatctaccctcctgggcagtagaagtt
gccccccgctgcatgacagtttttgaattagccgccagcctgcgggaggcggagcccgca
gtgatcggcaggctgcaggatgagaaattactgctggatgtgcgtacccttttaccgggt
gaagaaaccgccctggtagaagtgctggtcggagtgctcaagggaggtgttgcctcatga
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