Desulfoscipio gibsoniae: Desgi_2163
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Entry
Desgi_2163 CDS
T02657
Name
(GenBank) FAD binding protein,4Fe-4S protein
KO
K03388
heterodisulfide reductase subunit A2 [EC:
1.8.7.3
1.8.98.4
1.8.98.5
1.8.98.6
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00680
Methane metabolism
dgi01100
Metabolic pathways
dgi01120
Microbial metabolism in diverse environments
dgi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Desgi_2163
Enzymes [BR:
dgi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.7 With an iron-sulfur protein as acceptor
1.8.7.3 ferredoxin:CoB-CoM heterodisulfide reductase
Desgi_2163
1.8.98 With other, known, physiological acceptors
1.8.98.4 coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase
Desgi_2163
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
Desgi_2163
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
Desgi_2163
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
Fer4
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
Fer4_7
Pyr_redox
Pyr_redox_3
Fer4_6
HI0933_like
Fer4_16
Thi4
Fer4_21
Fer4_2
AlaDh_PNT_C
Amino_oxidase
GIDA
Fer4_10
FAD_binding_3
Fer4_9
Fer4_8
LdpA_Fe-S-bd
FMO-like
3HCDH_N
Fer4_15
Fer4_4
Fer4_22
Fer4_13
CbiG_C
Motif
Other DBs
NCBI-ProteinID:
AGL01595
UniProt:
R4KM48
LinkDB
All DBs
Position
complement(2211164..2214229)
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AA seq
1021 aa
AA seq
DB search
MIVSKNKSDRINNSKMVGTVLVIGAGISGMQSALDLAEVGYKVYIVEKSPAIGGRMPMLD
KTFPTNDCSMCILSPKLVECGRHRNIDVLTCSDVIGLSGDAGNYTVQVKKRPRYVDPDKC
VGCGSCAEACPVKVPNEFNQNLGQRKAIYKLYPQAYPNAYMIDATKCLKMKNPKACGKCI
KVCQSNAIDHNMQEEIVSLNVGAIILCPGYDLFNAELRGEYGYGVYENVLTSLQFERMLS
ASGPYEGHVQKADGTTPKKIAFIQCVGSRDVSLCNGYCSSVCCMYATKEAVIAKEHVPGL
DTTIFNMDIRAFGKDYEKYYNRAQNQSNVRYIKSMISSVKELPKTKELRVRYRTPEGMME
EDFEMLVLSVGLKPTQEAVELAGILGIELNGYNFCQLEELSGVQTSRKGIYVAGVFSGPK
DIPETVMQASAAAGDTAAFLSSVRNTQVTEMEFPQEKDVSEEEPRIGVFVCHCGINIASV
VDVPAVVEHVKQLPYVVYATNSLYACAQDSQLAMKELIEEHKLNRIVVASCSPRTHKPLF
QETMKEAGLNAALFEMANIRDQCSWVHQQQPDKATIKAKDLVSAAVAKAATLSAAKNVTV
DVTNTALVIGGGVSGMTSALSLVDQGYNVHLLEKSEQLGGMALRIHEGFNGENIPAFVQQ
LVNNVNNSPKIDVYTGSDIDEVTGYIGNFTTKLSSGQVLEHGVSIIATGGEEAKPTEYLY
GQDSRVLTQLELDEAIANNDPRVKSAENIVMIQCVGSREENRPYCSRICCTKTMKLALKM
KEINPDVSIIVLYRDIRTYSFNEDYYREARAKGVIFFRYDVDNKPKVELVGQNGQSKLRV
TATDHIMGETYDIDADILTLAVPIVPPESNHRLSQLLKVPLNPDNFFQEAHMKLRPVDFS
AEGIYMCGLAHGPKSIDESISQAKAAAGRATSILSHDKLESKGVVAVVNQDLCAACLTCV
RLCPFKAPRIAENHLAEIEAVICQGCGTCAGECPNKAITLQSYSHKQLTAQVEGMFNHPQ
Q
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
ttgattgtgagtaaaaacaaatccgatcgcataaataacagcaaaatggtgggcaccgtg
ctggttatcggcgcgggcatcagcggcatgcagtccgccctggatctggcagaggtgggg
tataaggtttatatcgtggagaaatcgccggccattggcggacgcatgcccatgctggac
aaaactttccccaccaacgactgctccatgtgtatcctttcccccaaactggtggaatgt
ggacggcaccgcaatattgatgtattaacctgctctgatgtaattggactttccggagac
gccggcaactacactgtccaggttaaaaagcgaccccgctatgtggatcccgacaaatgc
gtgggatgcggttcctgcgccgaggcttgcccggtgaaggtacccaacgagttcaaccaa
aacctgggccagcgtaaggccatttacaaactctatccacaggcgtatcccaacgcctat
atgattgatgccaccaaatgtttgaagatgaaaaatcccaaagcctgcggtaaatgtatc
aaagtctgccagtccaatgccattgaccataatatgcaggaagaaattgtttccttaaat
gtaggggcgataatactttgcccgggctatgatttatttaacgctgagctccggggtgaa
tacggctacggcgtatatgaaaacgtgcttaccagcctgcagtttgagcgcatgctgagc
gcctccggtccatacgaaggccatgtgcaaaaagccgacggtaccacccccaagaaaatc
gcctttatccagtgcgtgggctcccgggatgtatctttatgcaacggttactgctcttcg
gtttgctgtatgtacgccaccaaagaggccgttattgccaaagagcacgtgcccgggctt
gatactaccatttttaatatggacatccgggcgttcggtaaggattatgaaaaatattat
aaccgcgctcagaaccagtctaatgtgcgctatatcaagagtatgatttcatcggttaaa
gaactgcccaagaccaaagagctgcgggtacgctaccgcacccctgaaggaatgatggaa
gaagattttgaaatgctggtgctatccgttggcttaaaacctacccaggaggctgttgaa
ttagccgggatactaggcattgagcttaacggctataacttctgccagcttgaggaactt
tccggcgtccagacttcccgaaaagggatttacgtagccggtgtgttcagcggccccaaa
gatatacccgaaaccgtgatgcaggctagcgctgctgctggagacactgcggcctttttg
tcatcagtgcgtaatacccaggtaaccgaaatggaattcccccaggagaaggacgtcagc
gaagaagagccgcgcatcggggtgtttgtgtgccactgcggtattaacattgccagcgtg
gtggatgtacctgcggtggtagagcatgtaaaacagctgccctatgtggtttacgcaact
aacagtttgtacgcctgtgcccaggacagccagttggccatgaaggaactaatcgaggag
cacaaactcaatcgcattgtagtagcctcgtgcagcccccgcacccataagccccttttc
caggagaccatgaaagaagcaggcctgaatgctgcattgttcgagatggccaatatccgg
gaccagtgttcctgggtgcaccagcaacaacccgacaaggctactattaaagccaaggat
ttggtaagcgcggccgtggccaaggcagccacactgagtgctgctaaaaatgtgacggtg
gacgtaaccaacaccgcactggtcattggtggtggcgtgtccggcatgacttcagcgcta
agcctggtggatcagggctataatgtacatttgctggaaaagagcgaacagctgggcggt
atggcgctgcgtatccacgaaggattcaacggtgagaatataccggcatttgtgcaacag
ttagttaacaatgtcaataacagtcctaaaatagacgtgtatacaggcagtgatatagat
gaagtaacaggctacatcggcaattttacaactaagttatccagtgggcaagtgttggag
cacggtgtatccataatcgccaccgggggtgaggaggccaagcccaccgagtatctatac
ggccaggacagccgggtgttaacccagctagagctggatgaagcaatcgccaataacgac
ccccgggtcaagtcggccgagaatattgtaatgatccagtgtgtaggctcgcgggaggaa
aaccgtccctattgcagccgtatttgctgcaccaagactatgaaattagcccttaagatg
aaggaaattaaccccgatgtgtccattattgtgctttacagggatatccgtacttacagc
tttaacgaggactattatagggaggcccgtgccaagggtgtgatctttttccgctacgat
gtggataataaacccaaagtagagctggtgggccaaaacggccagagcaaattgcgggtc
accgccactgatcatatcatgggcgaaacatatgatattgacgcagacatactcaccctg
gcagtacctattgtgccgcccgagtctaaccatcggctgtcccagctgctcaaggtgccc
ctgaatccggataatttcttccaggaagcccacatgaagctgcgcccagttgacttttcc
gccgagggcatttatatgtgcgggttggctcatggtcccaaatccattgatgaaagcatt
tcccaggctaaagcggccgcaggtcgagctaccagtatcttaagccatgataagctggag
tccaagggcgtggtggcagtggtgaaccaggatctctgcgcggcctgcctaacctgcgtg
cggctgtgtccattcaaggccccacgcattgctgaaaatcacctggcggaaatagaggcg
gttatttgccagggatgcggcacctgcgccggtgaatgccccaacaaggccatcaccttg
caaagctacagccataagcagctaaccgcccaggtggagggtatgttcaaccacccccaa
caataa
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