Desulfoscipio gibsoniae: Desgi_2209
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Entry
Desgi_2209 CDS
T02657
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family
KO
K02405
RNA polymerase sigma factor FliA
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi02020
Two-component system
dgi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Desgi_2209
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Desgi_2209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dgi03021
]
Desgi_2209
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dgi02035
]
Desgi_2209
Transcription machinery [BR:
dgi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Desgi_2209
Bacterial motility proteins [BR:
dgi02035
]
Flagellar system
Flagellar assembly proteins
Stator
Desgi_2209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DarP
HTH_23
UTP15_C
Put_DNA-bind_N
UPF0122
PgaD
Motif
Other DBs
NCBI-ProteinID:
AGL01638
UniProt:
R4KEL6
LinkDB
All DBs
Position
complement(2250565..2251368)
Genome browser
AA seq
267 aa
AA seq
DB search
MFAISLKEWLSKSACVKRGEKMGDSITWEHYNLTKSSSLKEQLVLEHLNLVKYLAGRLAV
NTPSGMDREDLEGYGVIGLLDAIEKYNSKLGTKFANYAYTRIRGAMLDEIRKQNWVPRSK
WQQFDKLNKAKDRLLQKGNSVNEKELAQEMGIDSAQLRQLAAEYSNAFSIPLDNNNGQGI
EITLAESICNQKSPDPLEFITEQTEKEILVAAIKELSERDRLILALYYQEELTLKEIGSI
LEVTESRVCQLHSKAIQRLRERLTNLL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgctatatctttgaaagaatggctcagcaaaagcgcctgtgttaaacggggtgaa
aaaatgggcgactcaataacttgggaacattataacctaacaaaatcctcttctctaaaa
gaacagttagtattagaacatcttaatctggttaagtacctggccggtcgtctagcggtt
aatacaccatcgggtatggaccgggaggatctagagggctatggtgttataggactgctg
gatgccattgaaaaatataacagtaagctaggtactaaatttgcaaactacgcttatacc
agaatacggggggcaatgctggatgagattcgcaagcaaaactgggtacctcgcagcaaa
tggcaacaattcgacaagttaaacaaggctaaggataggttgttgcaaaagggaaattcc
gtaaatgaaaaagaattggctcaagaaatgggcatagatagtgctcaattaaggcagcta
gcagcagaatatagtaatgcattctctatacctctagataacaacaatggacaaggcatt
gagattacactggcggaatctatatgtaatcaaaagagcccggatccgctggaatttatc
acagagcaaactgagaaagaaatactggtagctgcaattaaagaattatcggaaagagat
aggcttatattggctctttattatcaagaggaacttactttaaaggaaatcggcagtatc
cttgaagttacagaatcccgagtttgccaattgcactctaaggcaattcaaaggttaaga
gaacgtctcaccaatcttctgtag
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