Desulfoscipio gibsoniae: Desgi_2511
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Entry
Desgi_2511 CDS
T02657
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi03030
DNA replication
dgi03430
Mismatch repair
dgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desgi_2511
03430 Mismatch repair
Desgi_2511
03440 Homologous recombination
Desgi_2511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dgi03032
]
Desgi_2511
03400 DNA repair and recombination proteins [BR:
dgi03400
]
Desgi_2511
Enzymes [BR:
dgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Desgi_2511
DNA replication proteins [BR:
dgi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Desgi_2511
DNA repair and recombination proteins [BR:
dgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Desgi_2511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_B_exo1
DNA_pol_A_exo1
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
AGL01918
UniProt:
R4KFG4
LinkDB
All DBs
Position
2551182..2551913
Genome browser
AA seq
243 aa
AA seq
DB search
MFFQLVETGKKNTCGKTPELDKELSLYIKKLASRGKIRIPKRLNLREIDFAVIDLETTGF
YPSGGDEIISIGAVLIRGGRIYRRLSFNRLVNPYRNIPEEVIRLTGISPNQVSKACSIYK
VMPDFLSFIDGNVLIGHMINFDLSFLNRKLKLCRTKIYNKSLDTANLAKALLPTLSDYSL
DGLLTRFNIGNEGRHTALGDALLTAQLFLALLELGFEKNTARWCDLDNCLKLSEQSEFIQ
FGI
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
ttgttctttcaactggttgaaaccgggaaaaaaaacacctgcgggaagacacccgaactg
gataaggaactgtcactctacataaaaaaacttgccagccggggtaaaattaggattccc
aaacggctcaatttaagagagattgacttcgctgtgattgatctggaaaccaccggcttt
tacccgtcaggcggggatgaaattatttccatcggggccgtgcttatccgaggtggcagg
atttaccggagattatcctttaaccggctggtcaacccataccggaacattcccgaagaa
gtaatacggctgacagggattagtccaaaccaggttagcaaagcctgttcaatttacaag
gtaatgcccgattttttaagctttattgacgggaacgtgctcataggtcatatgattaac
tttgatctcagtttcttaaaccgcaaactgaagttatgccggactaagatttataacaaa
tcgcttgacacggcaaacctggccaaagcacttctccccacccttagtgattattcactt
gatggcctgctgacccgtttcaatatcgggaacgagggcaggcacaccgcgctgggagac
gcattattaacggcccaacttttcctggctttgctcgaactgggctttgaaaaaaatacc
gccaggtggtgcgacctggacaactgcttaaagcttagtgaacaatcagaattcattcaa
ttcggcatctga
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