Desulfoscipio gibsoniae: Desgi_2603
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Entry
Desgi_2603 CDS
T02657
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00900
Terpenoid backbone biosynthesis
dgi01100
Metabolic pathways
dgi01110
Biosynthesis of secondary metabolites
Module
dgi_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Desgi_2603
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dgi01006
]
Desgi_2603
Enzymes [BR:
dgi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Desgi_2603
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Desgi_2603
2.5.1.29 geranylgeranyl diphosphate synthase
Desgi_2603
Prenyltransferases [BR:
dgi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Desgi_2603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Acyl-CoA_dh_1
Plasmid_stab_B
Motif
Other DBs
NCBI-ProteinID:
AGL02009
UniProt:
R4KHE3
LinkDB
All DBs
Position
complement(2639071..2639961)
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AA seq
296 aa
AA seq
DB search
MGFKEELARQANMVDEALNEYLPKAGSYPPLIHEAMRYSVFAGGKRLRPALVLAGARAVG
GDEKSVLQAACAIELLHTYSLVHDDLPAMDNDDFRRGNPTNHKVYGEAMAVLAGDALLTL
AFGLLAGVSQTGSFGADRVVRVIAEVAEAAGTAGLIGGQVVDMQSTGKSIDKQTLEYIHV
HKTGALYRASVRTGAILAGAAPEQLYHLTVYAENLGLAFQIVDDILDIAGDEQKLGKPIG
SDTKNQKATYPALHGLAAARSIARQAAEQANGALASFGAEADFLRGLVCFVINREY
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaaggaggagctggccaggcaggcgaatatggtggatgaggccctaaacgag
tacctaccgaaggcaggtagttacccgcccttgattcatgaggccatgcgttatagcgtt
tttgccggcggcaagcggctcaggcctgctttagtactggccggcgcccgggccgtaggt
ggggatgaaaaatccgtgctgcaggcagcctgtgccatagaactgctgcacacatactct
ctggtgcacgatgatttaccggccatggataatgacgattttcgccggggcaatcccacc
aaccataaagtgtacggtgaggccatggctgtgttggcgggtgacgcgctgctgaccctg
gccttcgggctgctggccggggtatctcaaaccggttcttttggagctgacagggtggtg
cgggtaattgccgaagttgctgaggcagccgggacagccggtttaataggtggccaggtg
gtggacatgcagtccaccggtaaatcaatcgataaacaaacgctggagtatatccatgtg
cataaaaccggtgcattgtacagggcatcggtacggaccggagctatattagccggtgca
gcccccgagcagctgtatcatcttactgtttatgccgaaaatctgggtctggcctttcaa
atcgtagatgatatactggatattgcaggggacgaacaaaagctgggcaagcctataggc
agcgacaccaaaaatcaaaaagccacctatccagcgctgcacggtttggctgcggccagg
agcatagccaggcaggcagcagagcaggctaatggtgctctggcttcctttggtgccgaa
gctgactttttgcgggggctggtttgttttgtaatcaacagagaatattga
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