Desulfoscipio gibsoniae: Desgi_2904
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Entry
Desgi_2904 CDS
T02657
Name
(GenBank) pyridoxal 5''-phosphate synthase, synthase subunit Pdx1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00750
Vitamin B6 metabolism
dgi01100
Metabolic pathways
dgi01240
Biosynthesis of cofactors
Module
dgi_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Desgi_2904
Enzymes [BR:
dgi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
Desgi_2904
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
TetR_C_27
Dus
FMN_dh
His_biosynth
NMO
Motif
Other DBs
NCBI-ProteinID:
AGL02302
UniProt:
R4KL50
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All DBs
Position
complement(2966824..2967708)
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AA seq
294 aa
AA seq
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MVEKGTWAVKKGLAEMLKGGVIMDVTTPEQAKIAEDAGACAVMALERVPADIRAAGGVAR
MADPTIIQRIMDAVTIPVMAKARIGHFVEAQILESLGVDYIDESEVLTPTDDTHHINKHV
FKVPFVCGARNLGEALRRIGEGAAMIRTKGEPGTGNVVEAVRHMRMVMGEIRRVQNLPKE
ELMSAAKEMGAPYDLMVQVAGLGRLPVVNFAAGGIATPADAALMMQLGCDGIFVGSGIFK
SNNPAVRAKAIVAATTHYNDPQILAEVSRDLGEAMPGLEIATISPEQRMQDRGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaaaaggaacttgggccgttaaaaaaggcttagcggaaatgttaaagggcggc
gtgatcatggacgtcaccacccccgagcaggctaagatagcggaagatgcgggcgcttgc
gccgtgatggccctggagcgggtcccggcggatatccgggctgccgggggagttgccagg
atggccgaccccaccatcatccagcggattatggatgccgtaaccatccctgtcatggcg
aaagcgcgcatcggccattttgtcgaagcgcagatcctggagtctctgggcgtggactac
attgacgaaagtgaagtgcttaccccgaccgacgacacccaccatatcaacaagcacgtc
tttaaggtgcccttcgtttgcggcgctagaaacttgggtgaggcgttgaggaggatcggc
gagggagcggcaatgatccggactaagggagagcccggcaccggtaacgttgttgaagcc
gtccggcatatgcggatggtaatgggtgaaattcgccgggttcagaatttacctaaggag
gaactaatgtcggcggccaaggaaatgggcgcaccgtatgacctgatggtgcaggttgcc
gggttggggcgtctgcccgtggtaaacttcgccgcagggggtatcgctactccagcagac
gccgcgctgatgatgcagctgggctgcgatggcatctttgtagggtccggcatattcaag
tccaataaccctgcagtccgggccaaggctattgtggctgccaccacccattacaacgac
ccgcaaatcctggcagaggtatccagggatctgggcgaggccatgcccggcctggagata
gccaccatttcaccagagcaaaggatgcaggaccgcgggtggtag
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