Desulfoscipio gibsoniae: Desgi_2977
Help
Entry
Desgi_2977 CDS
T02657
Name
(GenBank) putative heme d1 biosynthesis radical SAM protein NirJ1
KO
K22226
Fe-coproporphyrin III synthase
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00860
Porphyrin metabolism
dgi01100
Metabolic pathways
dgi01110
Biosynthesis of secondary metabolites
dgi01240
Biosynthesis of cofactors
Module
dgi_M00847
Heme biosynthesis, archaea, siroheme => heme
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Desgi_2977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
SPASM
Motif
Other DBs
NCBI-ProteinID:
AGL02363
UniProt:
R4KGN3
LinkDB
All DBs
Position
complement(3034730..3035899)
Genome browser
AA seq
389 aa
AA seq
DB search
MISVSRLLCGAKFYGDSLRYKADSGVQRHGTTAGHGPVVVWNMTRTCNLRCLHCYAGSDE
RVDPGQLTTKEAKHFIDGLVDFNVPVLLFSGGEPLIREDFFNLAGYARGKGIRATLSTNG
TLITRDVARDIKCLGIGYVGVSLDGIGSENDRFRGRQGAFDAALEGIRACRAIDQRVGLR
FTINRHNYDQLPDIFKLIEEEDIPRICFYHLVYSGRGSKMRDEDISHEETRAAMNLIIEK
TRDFYLRGLNKEILTVDNHADGVYIYLSLLRSDPERAERVRELLLMNGGNRSGVAIGAVD
WAGNVHPDQFTRNHVLGSVRERPFAEIWQDTGHPVLRGLKNRKPLLTGRCAACRWLAVCN
GNFRARAEAVYGDFWASDPACYLTGEEIK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgttagcagattgctctgcggagccaagttttacggcgactcgctccgttac
aaagcggactcgggcgtccaacgacacggcaccactgcgggacacggtccggtggtggta
tggaatatgacccgtacctgtaacctgcgctgcctgcactgctacgccggttccgacgag
cgggtggaccccggccagttgaccaccaaagaggcgaaacatttcattgacgggctggtg
gattttaatgtgccggtgctccttttttccggcggcgagcccttgatcagggaagatttt
tttaacctggcggggtatgccaggggcaagggcatccgggccactttatccaccaacggc
acgttaatcacccgggatgtggcccgggacatcaaatgcctgggcatcggttacgtgggc
gtcagcctggacggcatcggttccgaaaacgaccggttccggggccgccagggcgcgttc
gacgccgccctggaagggatccgcgcctgccgggccattgaccagcgagtgggactgcgc
tttaccatcaaccggcataactacgaccaactaccggacatttttaagttaatcgaagaa
gaagacatcccccggatttgcttttaccacttggtttacagcggccggggcagcaaaatg
cgcgacgaggatatctcccacgaggagacccgcgccgccatgaacttgatcattgaaaaa
accagggatttttacctccgaggtctgaacaaggaaatcctcactgtggataaccacgcc
gacggagtctatatttacctttcactgctgcgttcagaccccgagagggccgagcgggtg
cgcgagttgctcctgatgaacgggggtaatcgctccggggtggccatcggggcggtggac
tgggccggcaacgtacatcccgaccagttcacccgcaatcacgtgctgggcagcgtacgg
gagaggccgttcgccgagatctggcaggataccggccatcccgtgctgcgcgggttgaaa
aaccgcaagcccttgcttacggggcgctgcgccgcctgtcgctggctggccgtgtgcaac
ggaaatttccgggcccgggcggaagcggtatacggcgatttctgggcttcagaccccgcc
tgctacctgaccggcgaagagataaagtaa
DBGET
integrated database retrieval system
