Desulfoscipio gibsoniae: Desgi_3473
Help
Entry
Desgi_3473 CDS
T02657
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dgi03009
]
Desgi_3473
Enzymes [BR:
dgi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Desgi_3473
Ribosome biogenesis [BR:
dgi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Desgi_3473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
PrmA
Methyltransf_31
MTS
Methyltransf_25
TRM5-TYW2_MTfase
TPR_12
Cons_hypoth95
PDGF
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AGL02807
UniProt:
R4KML8
LinkDB
All DBs
Position
complement(3492631..3493995)
Genome browser
AA seq
454 aa
AA seq
DB search
MQEGQEVKLHITDINRYGEGIGRADEGMVVFVPGAMTGEQVTVRIGELRKRYARGELLET
VKPSEYRVMPSCNMAERCGGCNLQHIAYDEQLRWKTDLVRQNIARIGGVDGGVVRDIISM
PDPWHYRNNVRFKMRRQGGKVVLGFFAAESHQLVASVDGGHGTSCLLAHRDLGRVAEAVQ
AVLEDSPAGAALPEEIILRRGGTGEVMVVLIIKSTGAKSGEDLAGLTGKISAIPGVVTIV
GYTQNIGKKIAGRYQTLAGRGYIEDKIEGLRFRISAASFYQVNPSQTVALYQKALEYCAL
QGHEEVADAYCGVGTIALYVARYAKAVRGYEVVPGAVRDAEANAALNGIKNTRFFVGAVE
RVLTEHVDKGYRPEVVVLDPPRSGCRPEVLDALAQSGARRVVYVSCDPATLSRDLGYLHQ
LGFMLQEVQPVDMFPHTGHVETIILMTNSGFKGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggaaggacaggaagtaaaactacatataacggatattaaccgctatggtgagggt
atcgggcgggctgatgagggtatggtggtttttgtacccggtgcgatgaccggagagcag
gttacagtgcgaattggagagctgcgtaagagatatgcccggggggagctgttggaaacc
gttaaaccttcggaatacagggtaatgccgtcctgtaacatggctgaacgctgcggtggc
tgtaatctacagcatattgcctacgacgaacagctgaggtggaagaccgacctggtcagg
caaaatatagctcgcataggtggtgttgacgggggtgtggtgcgcgatatcatcagcatg
ccggacccctggcattaccgcaacaatgtgcgttttaaaatgcggcggcaaggcggaaaa
gtggtgctgggttttttcgctgcggaatcacaccaactggtggcgagcgtcgatggtggt
cacgggacttcgtgcctgctggcccaccgggatttgggccgggtggccgaagcggttcag
gcggtgctggaggatagcccggcaggtgcggcattaccggaggaaattattctgcgccgg
ggcggcaccggtgaagtgatggtagtattgatcatcaaatctacaggtgcaaaaagcggg
gaggacttggccggattaaccggtaaaatatccgctattccaggagtggtaacaatagtg
ggttatacccaaaacatcggtaaaaaaatagccggccgctaccaaactctggctggccgg
ggctatatcgaagataaaatagaagggttgcgttttcgcatttccgctgcttccttttat
caggtgaacccatcccaaaccgtcgcgctataccaaaaggcactggaatactgcgctttg
caggggcatgaagaggtagccgacgcgtactgtggggtaggcaccattgccttatacgtg
gcccggtacgccaaagcggtgcggggttacgaggtagtaccgggagcggtgcgggacgcc
gaagccaacgccgcgcttaacggtataaaaaacacccgtttctttgtcggtgcggtggag
cgggtgctaacggagcacgtggataagggataccgtccggaggtggtggtgctggacccg
ccccgtagtggctgccgccccgaggtgctggatgccctggcccagagcggtgcccggcgg
gtggtctacgtttcctgcgatccggctacgttatccagggacttggggtatctacatcag
ttgggttttatgctgcaggaagtgcagcccgtggacatgttcccgcatacggggcatgtt
gagacgataattctgatgacaaatagtggttttaagggcaaatga
DBGET
integrated database retrieval system
